Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC010627.1-201ENST00000503819 1294 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC091435.1-201ENST00000505442 584 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 MIR378F-201ENST00000578143 78 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 MIR4305-201ENST00000583252 102 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 MIR147B-201ENST00000390185 80 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 RPL23AP95-201ENST00000426806 265 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
COL6A5A8TX70 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 AL121839.1-201ENST00000556233 1185 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AL160236.1-201ENST00000556317 195 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL6A5A8TX70 MIR3117-201ENST00000584034 78 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC021646.1-201ENST00000605469 484 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC087045.1-201ENST00000605856 382 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AL592148.2-201ENST00000612210 372 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC008555.8-201ENST00000623602 2168 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 AL356432.1-201ENST00000405809 419 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
COL6A5A8TX70 AC010301.1-201ENST00000473936 355 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.49□□□□□ -2.33
COL6A5A8TX70 AC098862.1-201ENST00000504991 413 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 NDUFB4P2-201ENST00000509515 391 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 OR5AL2P-201ENST00000532185 920 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 NUTF2P8-201ENST00000604593 363 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.49□□□□□ -2.33
COL6A5A8TX70 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.49□□□□□ -2.33
COL6A5A8TX70 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
COL6A5A8TX70 AL356473.1-201ENST00000406203 1408 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 Y_RNA.52-201ENST00000362760 96 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 RNU6-1184P-201ENST00000384588 108 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.49□□□□□ -2.33
COL6A5A8TX70 CR769776.1-201ENST00000441254 787 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 RNU6-782P-201ENST00000516852 104 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 AC012254.4-201ENST00000588843 273 ntBASIC0.49□□□□□ -2.33
COL6A5A8TX70 Y_RNA.203-201ENST00000364106 102 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 Y_RNA.375-201ENST00000365625 101 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 RNU6-225P-201ENST00000384613 103 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 RPL23AP32-201ENST00000395315 459 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 COL6A4P2-205ENST00000509855 506 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 MIR4529-201ENST00000578110 78 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 MIR548AX-201ENST00000580117 73 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC004987.4-201ENST00000603383 338 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC067838.1-201ENST00000606064 577 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC087359.1-201ENST00000508335 1740 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC007785.2-201ENST00000598627 1916 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
COL6A5A8TX70 Y_RNA.583-201ENST00000391033 113 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 RNU4-78P-201ENST00000410940 126 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 UBE2FP1-201ENST00000416536 447 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 SFR1P2-201ENST00000421841 730 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 TOMM22P2-201ENST00000430735 237 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 RNU6-1218P-201ENST00000458990 108 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC108120.2-201ENST00000512973 294 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.48□□□□□ -2.33
COL6A5A8TX70 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL6A5A8TX70 AC106791.2-201ENST00000604680 391 ntBASIC0.48□□□□□ -2.33
COL6A5A8TX70 RNU1-96P-201ENST00000364163 162 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 SNORA51.6-201ENST00000384151 125 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 MIR934-201ENST00000401241 83 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 RPL21P66-201ENST00000426566 466 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.47□□□□□ -2.33
COL6A5A8TX70 AC109635.4-202ENST00000531666 412 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
COL6A5A8TX70 AGGF1P5-201ENST00000567900 919 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 FAM60BP-201ENST00000578364 658 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A5A8TX70 MIR6718-201ENST00000616153 80 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 AC027335.2-201ENST00000624030 375 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 AP003485.1-201ENST00000625093 753 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 RN7SKP61-201ENST00000410642 295 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 RNU6-193P-201ENST00000410977 107 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A5A8TX70 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.47□□□□□ -2.33
COL6A5A8TX70 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.47□□□□□ -2.33
COL6A5A8TX70 OR5B19P-201ENST00000531766 928 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 XIAPP1-201ENST00000603162 600 ntBASIC0.47□□□□□ -2.33
COL6A5A8TX70 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 OR6C72P-201ENST00000451403 892 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 SUMO2P2-201ENST00000456482 255 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC118282.2-201ENST00000508739 374 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 TPT1P8-201ENST00000510120 555 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 RNU6-920P-201ENST00000410926 92 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 MTCO3P4-201ENST00000419236 787 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC004383.1-201ENST00000438135 289 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms