Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 TPRKBP2-201ENST00000565969 475 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC245389.1-201ENST00000605141 529 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 MTND4LP5-201ENST00000605152 292 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 AP001486.3-201ENST00000615334 372 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 UCA1.1-201ENST00000620952 75 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 U6.99-201ENST00000637524 83 ntBASIC2.52□□□□□ -2.01
SRRM4A7MD48 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.52□□□□□ -2.01
SRRM4A7MD48 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SRRM4A7MD48 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SRRM4A7MD48 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SRRM4A7MD48 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 SNORA24.1-201ENST00000384401 135 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RNU6-456P-201ENST00000384493 107 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RNU6-658P-201ENST00000384606 106 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 SNORA46-201ENST00000384762 135 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RNU6-750P-201ENST00000390946 107 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 NDUFB4P5-201ENST00000415445 361 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 SKA2P1-201ENST00000425592 390 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 MRPS10P2-201ENST00000431226 381 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 RPL23AP58-201ENST00000440453 469 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 NIPA2P5-201ENST00000452282 464 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 C1DP4-201ENST00000455429 424 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RNU7-182P-201ENST00000459009 62 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 RN7SL75P-201ENST00000461926 281 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC079382.1-201ENST00000493346 557 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC105252.1-201ENST00000503089 286 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 PSMA2P1-201ENST00000526365 646 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL133241.1-201ENST00000556832 487 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC007151.1-201ENST00000572774 483 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 AC008739.2-201ENST00000597006 317 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL022154.1-201ENST00000604698 785 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 AL158032.1-201ENST00000605401 106 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 U6.42-201ENST00000618440 107 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 MIR7975-201ENST00000619350 68 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 ADAM3A-203ENST00000461344 2157 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 MTND5P19-201ENST00000424872 1794 ntBASIC2.51□□□□□ -2.01
SRRM4A7MD48 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SRRM4A7MD48 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
SRRM4A7MD48 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 OR4G2P-201ENST00000328113 903 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 RNU6-181P-201ENST00000363225 107 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RNU6-61P-201ENST00000365528 109 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RNU6-606P-201ENST00000384721 111 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RNU6-1025P-201ENST00000410629 104 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC114491.1-201ENST00000416095 246 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 MTND4LP11-201ENST00000422184 280 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 MTND4P18-201ENST00000447010 465 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 HMGN2P10-201ENST00000448085 265 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC132479.1-201ENST00000449160 144 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AL441985.1-201ENST00000457727 251 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 GMFBP1-201ENST00000467831 427 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RPL27AP5-201ENST00000469428 449 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RPS3AP17-201ENST00000472594 777 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 RPL9P6-201ENST00000492764 598 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 EIF4EP3-201ENST00000498782 656 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC110794.1-201ENST00000505816 425 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC009901.1-201ENST00000506703 541 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC091133.4-201ENST00000511142 308 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 SNORD27.1-201ENST00000516319 72 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 RNU6-445P-201ENST00000516949 107 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms