Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC093838.1-201ENST00000613014 469 ntBASIC3.32□□□□□ -1.88
SRRM3A6NNA2 AC130324.3-201ENST00000614165 542 ntBASIC3.32□□□□□ -1.88
SRRM3A6NNA2 AC010133.1-201ENST00000615809 842 ntBASIC3.32□□□□□ -1.88
SRRM3A6NNA2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SRRM3A6NNA2 AC024940.5-201ENST00000622889 474 ntBASIC3.32□□□□□ -1.88
SRRM3A6NNA2 FRG1KP-201ENST00000623592 341 ntBASIC3.32□□□□□ -1.88
SRRM3A6NNA2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SRRM3A6NNA2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
SRRM3A6NNA2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRRM3A6NNA2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SRRM3A6NNA2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNU5E-8P-201ENST00000363502 116 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNU6-74P-201ENST00000384235 107 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 MIR558-201ENST00000384920 94 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 MIR1-2-201ENST00000384961 85 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNA5SP229-201ENST00000410809 99 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNU6-373P-201ENST00000411247 98 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 BEND7P1-201ENST00000422058 457 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RPS12P18-201ENST00000442381 270 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 U3.44-201ENST00000458938 192 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNA5SP401-201ENST00000515920 127 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNA5SP76-201ENST00000516277 87 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC128657.1-201ENST00000549459 145 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC015917.1-201ENST00000579654 510 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC011712.1-201ENST00000588959 234 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AP001429.1-201ENST00000602568 530 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 DISC2.1-201ENST00000612827 205 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AL136221.1-201ENST00000621449 509 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 AC244517.1-201ENST00000606030 2086 ntBASIC3.31□□□□□ -1.88
SRRM3A6NNA2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.31□□□□□ -1.88
SRRM3A6NNA2 RNU6-511P-201ENST00000363496 107 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 Y_RNA.356-201ENST00000365475 113 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 RNU4-48P-201ENST00000365559 182 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 RNU6-1011P-201ENST00000384668 107 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AL109755.1-201ENST00000401791 649 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 RNU6-1068P-201ENST00000410958 103 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AL121871.1-201ENST00000443413 436 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 GSTA11P-201ENST00000452866 669 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 RN7SL432P-201ENST00000484057 298 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MTCO3P9-201ENST00000506989 781 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC105417.1-201ENST00000514691 285 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 SNORD27.1-201ENST00000516319 72 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 SNORD60.2-201ENST00000516883 86 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 IGKV2-26-201ENST00000518305 343 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 OR5B19P-201ENST00000531766 928 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MIR4435-1-201ENST00000582552 80 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MIR6130-201ENST00000619419 109 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MIR7843-201ENST00000622274 79 ntBASIC3.3□□□□□ -1.88
SRRM3A6NNA2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
SRRM3A6NNA2 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
SRRM3A6NNA2 RNA5SP295-201ENST00000362655 121 ntBASIC3.29□□□□□ -1.88
SRRM3A6NNA2 Y_RNA.142-201ENST00000363491 102 ntBASIC3.29□□□□□ -1.88
SRRM3A6NNA2 Y_RNA.157-201ENST00000363638 102 ntBASIC3.29□□□□□ -1.88
SRRM3A6NNA2 RNU6-263P-201ENST00000363811 107 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms