Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RAB9BP1-201ENST00000519581 626 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AP000873.5-201ENST00000533906 236 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 MIR4775-201ENST00000581168 75 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AL627309.6-201ENST00000606857 840 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 BX323046.1-201ENST00000610145 535 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC005332.10-201ENST00000612725 619 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 RMST_4.1-201ENST00000616886 107 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 uc_338.11-201ENST00000619132 160 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC073346.2-201ENST00000624724 2058 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
TRAV34A0A0B4J273 AC093831.2-201ENST00000624393 3427 ntBASIC2.55□□□□□ -2
TRAV34A0A0B4J273 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 OR4G2P-201ENST00000328113 903 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-1287P-201ENST00000362914 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 Y_RNA.77-201ENST00000362962 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-181P-201ENST00000363225 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNA5SP51-201ENST00000364750 119 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-487P-201ENST00000365430 104 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU4-48P-201ENST00000365559 182 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-116P-201ENST00000384042 109 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-456P-201ENST00000384493 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-1060P-201ENST00000384664 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AL133475.1-201ENST00000404414 305 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RPL32P35-201ENST00000415214 394 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 TOMM20P4-201ENST00000427861 435 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 CYCSP4-201ENST00000429682 331 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 VN1R34P-201ENST00000447387 883 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC012308.1-201ENST00000451232 178 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC026402.1-201ENST00000513642 170 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 SNORA25.11-201ENST00000515935 105 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNU6-445P-201ENST00000516949 107 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RN7SKP272-201ENST00000516988 232 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RNA5SP503-201ENST00000517047 117 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 MTCO2P4-201ENST00000517968 247 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 OR4R1P-201ENST00000529879 463 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC135279.1-201ENST00000543493 504 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AL133241.1-201ENST00000556832 487 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 Z84480.1-201ENST00000605131 311 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC009161.2-201ENST00000624626 138 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 AC073476.4-201ENST00000628409 72 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 LRRC77P-213ENST00000637727 880 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TRAV34A0A0B4J273 MTND5P19-201ENST00000424872 1794 ntBASIC2.54□□□□□ -2
TRAV34A0A0B4J273 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 U3.6-201ENST00000363622 211 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 RNU6-348P-201ENST00000384386 107 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 RNU6-843P-201ENST00000384454 104 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 RAP1BP3-201ENST00000407180 549 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 CYCSP19-201ENST00000411715 316 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AC000111.3-201ENST00000433478 193 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 CALM1P1-201ENST00000442082 433 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAV34A0A0B4J273 RNU1-86P-201ENST00000516108 154 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 Y_RNA.687-201ENST00000516558 91 ntBASIC2.53□□□□□ -2
TRAV34A0A0B4J273 Y_RNA.688-201ENST00000516565 95 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms