Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC010900.2-201ENST00000604508 210 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR5739-201ENST00000619803 80 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL136313.1-201ENST00000624804 202 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 RNA5SP240-201ENST00000365355 128 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU1-78P-201ENST00000391248 165 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AL449283.1-202ENST00000418249 604 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AC008850.1-201ENST00000427546 362 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 ZYG11AP1-201ENST00000430329 837 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 USP9YP24-201ENST00000434374 697 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AL590365.1-201ENST00000450788 243 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AC244505.3-201ENST00000454598 187 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 COX7A2P2-201ENST00000505291 250 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 SNORD19.2-201ENST00000516978 73 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AP003497.1-201ENST00000528472 562 ntBASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV1-2A0A0B4J238 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 ZNF680P1-201ENST00000436625 1469 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR561-201ENST00000385216 97 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR618-201ENST00000385287 98 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU2-33P-201ENST00000410344 192 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 UBE2V1P4-201ENST00000425374 344 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC241584.1-201ENST00000438469 1241 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AL161788.1-201ENST00000441805 169 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC079448.1-201ENST00000449377 373 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC009268.1-201ENST00000561352 1203 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC023825.1-201ENST00000566704 1030 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR3945-201ENST00000581853 98 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC091152.3-201ENST00000604227 325 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 BX322635.1-201ENST00000605804 496 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AL391813.2-201ENST00000609113 322 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR6857-201ENST00000613267 93 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AL590396.2-201ENST00000636511 1041 ntBASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005539.1-201ENST00000443768 1479 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 TEX21P-201ENST00000447107 1476 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 NDUFS5P4-201ENST00000412983 318 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 PPP1R11P2-201ENST00000423543 382 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 SKA2P1-201ENST00000425592 390 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 FCF1P6-201ENST00000456841 595 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 CYP2C59P-201ENST00000457790 269 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 MTCO1P31-201ENST00000506355 492 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005668.1-201ENST00000571142 476 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AC026271.5-201ENST00000577873 130 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 AP005136.1-201ENST00000579765 429 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR4422-201ENST00000581938 83 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 GAS5-AS1-201ENST00000602767 694 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 U2.21-201ENST00000637295 81 ntBASIC0.68□□□□□ -2.3
TRAV1-2A0A0B4J238 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 Y_RNA.67-201ENST00000362870 100 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-251P-201ENST00000363235 104 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 RNA5SP465-201ENST00000391195 109 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-77P-201ENST00000410554 91 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 USP9YP19-201ENST00000412165 485 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 USP9YP13-201ENST00000417797 480 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 PSMA6P3-201ENST00000428242 164 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AL354941.1-201ENST00000438600 464 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AL691517.1-201ENST00000440833 1235 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AL137159.1-201ENST00000452808 512 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 MTND2P24-201ENST00000453434 806 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 RNA5SP57-201ENST00000459463 123 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005908.1-201ENST00000468701 347 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 SMURF2P1-201ENST00000514992 481 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-416P-201ENST00000516265 103 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 SNORA48.11-201ENST00000517015 89 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 ARL2BPP5-201ENST00000523141 481 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 BNIP3P23-201ENST00000599655 511 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 HSPE1P19-201ENST00000603327 295 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms