Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
U3KQE9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
U3KQE9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 AL079305.1-201ENST00000623159 3008 ntBASIC3.95□□□□□ -1.78
U3KQE9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 AC087190.4-201ENST00000574616 8334 ntBASIC3.95□□□□□ -1.78
U3KQE9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 SNORD32A-201ENST00000364805 84 ntBASIC3.95□□□□□ -1.78
U3KQE9 SNORA67-201ENST00000384423 137 ntBASIC3.95□□□□□ -1.78
U3KQE9 SNORA22C-201ENST00000384614 134 ntBASIC3.95□□□□□ -1.78
U3KQE9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
U3KQE9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 AC007738.1-201ENST00000413892 348 ntBASIC3.95□□□□□ -1.78
U3KQE9 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
U3KQE9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.95□□□□□ -1.78
U3KQE9 AC008267.6-201ENST00000441664 139 ntBASIC3.95□□□□□ -1.78
U3KQE9 RPL7AP61-201ENST00000443410 636 ntBASIC3.95□□□□□ -1.78
U3KQE9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.95□□□□□ -1.78
U3KQE9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 RNY3P16-201ENST00000516338 101 ntBASIC3.95□□□□□ -1.78
U3KQE9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.95□□□□□ -1.78
U3KQE9 RNU6-58P-201ENST00000517143 103 ntBASIC3.95□□□□□ -1.78
U3KQE9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.95□□□□□ -1.78
U3KQE9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.95□□□□□ -1.78
U3KQE9 LINC00933-203ENST00000559812 219 ntBASIC3.95□□□□□ -1.78
U3KQE9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.95□□□□□ -1.78
U3KQE9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 AC233702.2-202ENST00000562547 291 ntBASIC3.95□□□□□ -1.78
U3KQE9 AC055872.1-201ENST00000570978 278 ntBASIC3.95□□□□□ -1.78
U3KQE9 KLKP1-201ENST00000595979 403 ntBASIC3.95□□□□□ -1.78
U3KQE9 AP005432.2-201ENST00000608162 586 ntBASIC3.95□□□□□ -1.78
U3KQE9 AC068831.7-201ENST00000616954 363 ntBASIC3.95□□□□□ -1.78
U3KQE9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.95□□□□□ -1.78
U3KQE9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.95□□□□□ -1.78
U3KQE9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.95□□□□□ -1.78
U3KQE9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.95□□□□□ -1.78
U3KQE9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.95□□□□□ -1.78
U3KQE9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.95□□□□□ -1.78
U3KQE9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
U3KQE9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 BRAFP1-201ENST00000445336 2703 ntBASIC3.94□□□□□ -1.78
U3KQE9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.94□□□□□ -1.78
U3KQE9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
U3KQE9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.94□□□□□ -1.78
U3KQE9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 ZNF204P-201ENST00000416749 2397 ntBASIC3.94□□□□□ -1.78
U3KQE9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
U3KQE9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.94□□□□□ -1.78
U3KQE9 Y_RNA.75-201ENST00000362927 97 ntBASIC3.94□□□□□ -1.78
U3KQE9 RNU6-961P-201ENST00000363893 105 ntBASIC3.94□□□□□ -1.78
U3KQE9 RNA5SP242-201ENST00000364171 118 ntBASIC3.94□□□□□ -1.78
U3KQE9 Y_RNA.586-201ENST00000391146 98 ntBASIC3.94□□□□□ -1.78
U3KQE9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
U3KQE9 U3.32-201ENST00000408116 212 ntBASIC3.94□□□□□ -1.78
U3KQE9 RPS26P42-201ENST00000413485 326 ntBASIC3.94□□□□□ -1.78
U3KQE9 COX6CP13-201ENST00000428703 226 ntBASIC3.94□□□□□ -1.78
U3KQE9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.94□□□□□ -1.78
U3KQE9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.94□□□□□ -1.78
U3KQE9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.94□□□□□ -1.78
U3KQE9 AC009237.8-201ENST00000445492 379 ntBASIC3.94□□□□□ -1.78
U3KQE9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.94□□□□□ -1.78
U3KQE9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.94□□□□□ -1.78
U3KQE9 RN7SL441P-201ENST00000492388 296 ntBASIC3.94□□□□□ -1.78
U3KQE9 AL136038.1-201ENST00000497246 351 ntBASIC3.94□□□□□ -1.78
U3KQE9 AC097462.2-201ENST00000504623 481 ntBASIC3.94□□□□□ -1.78
U3KQE9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.94□□□□□ -1.78
U3KQE9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.94□□□□□ -1.78
U3KQE9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.94□□□□□ -1.78
U3KQE9 CYCSP39-201ENST00000565821 309 ntBASIC3.94□□□□□ -1.78
U3KQE9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.94□□□□□ -1.78
U3KQE9 MIR6837-201ENST00000620884 64 ntBASIC3.94□□□□□ -1.78
U3KQE9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.94□□□□□ -1.78
U3KQE9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
U3KQE9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.94□□□□□ -1.78
U3KQE9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.94□□□□□ -1.78
U3KQE9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
U3KQE9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms