Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RNU1-41P-201ENST00000516161 162 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU1-48P-201ENST00000516400 162 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 DEFB108D-201ENST00000527787 222 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC018630.1-201ENST00000541376 925 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AL157687.1-201ENST00000554853 619 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 SUB1P2-201ENST00000556401 297 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC025449.1-201ENST00000603896 529 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC245517.5-201ENST00000611529 162 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC139792.3-201ENST00000623525 224 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
PCDHAC2Q9Y5I4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 Y_RNA.38-201ENST00000362617 102 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-859P-201ENST00000362728 107 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP68-201ENST00000363885 119 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU5A-8P-201ENST00000364102 114 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 SNORA20.2-201ENST00000383922 131 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU2-62P-201ENST00000410868 191 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 UBE2FP1-201ENST00000416536 447 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 ELOCP4-201ENST00000420090 333 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU7-59P-201ENST00000459101 61 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 VN1R17P-201ENST00000472048 1090 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 TRBV12-1-201ENST00000479785 344 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RPS15AP36-201ENST00000492022 382 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP148-201ENST00000516527 94 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC104383.1-201ENST00000530297 370 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC025678.1-201ENST00000567861 338 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC012182.1-201ENST00000570133 895 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC008536.2-201ENST00000607284 349 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AL450472.3-201ENST00000615578 367 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 uc_338.12-201ENST00000616344 181 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007742.2-201ENST00000618226 398 ntBASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
PCDHAC2Q9Y5I4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-39P-201ENST00000384344 107 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 SNORA67.4-201ENST00000384688 142 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU4-65P-201ENST00000410473 140 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 BMS1P22-201ENST00000414726 313 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC138393.2-201ENST00000414742 246 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 MTND4P28-201ENST00000426217 387 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 HMGN1P10-201ENST00000474557 553 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC008413.1-201ENST00000511864 177 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC109635.4-202ENST00000531666 412 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms