Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MTATP6P7-201ENST00000453315 681 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 CECR9-201ENST00000453421 199 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AL033528.1-201ENST00000453780 140 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORD42A-201ENST00000459584 64 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 GLYCAM1-201ENST00000546596 285 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC007151.1-201ENST00000572774 483 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC005771.1-201ENST00000585581 349 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC110760.3-201ENST00000598794 467 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 MTND4LP5-201ENST00000605152 292 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AL451064.1-201ENST00000607718 471 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AL449363.1-201ENST00000617815 186 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC093831.2-201ENST00000624393 3427 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 ELL2P3-201ENST00000457883 1602 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 UBE2L2-201ENST00000254302 429 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU5E-1-201ENST00000362477 120 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-960P-201ENST00000364056 120 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR196B-201ENST00000384852 84 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORA40.3-201ENST00000390964 122 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-817P-201ENST00000391083 104 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RPL23AP32-201ENST00000395315 459 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL513475.1-201ENST00000406602 315 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU2-8P-201ENST00000410727 190 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC010153.1-201ENST00000432862 727 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC119618.1-201ENST00000434191 222 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL121890.1-201ENST00000435457 205 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RPS12P18-201ENST00000442381 270 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC009961.3-201ENST00000449832 765 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 snoU109.1-201ENST00000459339 135 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC105252.1-201ENST00000503089 286 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP165-201ENST00000517142 115 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 CYCSP39-201ENST00000565821 309 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC174048.1-201ENST00000603389 144 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 Z69908.1-201ENST00000622603 247 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 AC010329.5-201ENST00000623497 2174 ntBASIC2.8□□□□□ -1.96
PCDHGA1Q9Y5H4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 MTND5P19-201ENST00000424872 1794 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR1261-201ENST00000408659 82 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC023141.4-201ENST00000412031 328 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC009296.1-201ENST00000443146 155 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 ST13P20-201ENST00000447996 1065 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 FABP5P15-201ENST00000453566 214 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC126389.1-201ENST00000477436 290 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 RAP1BP2-201ENST00000478270 544 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 MRPS36P2-201ENST00000512569 299 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP471-201ENST00000516971 106 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORD19.2-201ENST00000516978 73 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC079600.2-201ENST00000550076 130 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC091544.4-201ENST00000555268 342 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC090616.3-201ENST00000582184 217 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms