Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP001025.1-201ENST00000486139 332 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC006272.2-201ENST00000594725 163 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC136601.2-201ENST00000604356 474 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AL365265.1-201ENST00000621045 234 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 U6.99-201ENST00000637524 83 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC022893.2-201ENST00000564832 3296 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 SAMMSON-226ENST00000642089 1582 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AL079305.1-201ENST00000623159 3008 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.136-201ENST00000363444 102 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-923P-201ENST00000364753 107 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.446-201ENST00000384178 104 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-1289P-201ENST00000384431 106 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AL078599.1-201ENST00000402075 293 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 RNA5SP44-201ENST00000410446 133 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC009238.2-201ENST00000431026 355 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 SNRPEP9-201ENST00000436794 238 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AL031659.1-201ENST00000447075 539 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 SSXP4-201ENST00000451349 245 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AL671862.1-201ENST00000515851 349 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-567P-201ENST00000516746 107 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AP004607.1-201ENST00000524456 203 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC008749.1-201ENST00000597650 306 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC108706.1-201ENST00000611053 297 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AC073349.3-201ENST00000617616 186 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 IGHVIII-44-202ENST00000636235 289 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB11Q9Y5F2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AC025031.4-201ENST00000621248 3271 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AL356489.2-201ENST00000566968 3528 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 MIR141-201ENST00000384975 95 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 U3.39-201ENST00000408569 239 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 RPS12P23-201ENST00000419579 400 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AC009220.1-201ENST00000451614 275 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 snoU13.24-201ENST00000458998 104 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AL132838.2-201ENST00000492041 314 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 RN7SL244P-201ENST00000493405 297 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 CYCSP39-201ENST00000565821 309 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AC005296.1-201ENST00000616145 209 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB11Q9Y5F2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-626P-201ENST00000363354 107 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 RN7SKP113-201ENST00000363891 295 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 RNA5SP455-201ENST00000365190 119 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-541P-201ENST00000384709 110 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 MIR10B-201ENST00000385011 110 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-1135P-201ENST00000411083 103 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 AC243964.1-201ENST00000441814 261 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 H2AFZP5-201ENST00000446960 382 ntBASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB11Q9Y5F2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms