Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 NIFKP6-201ENST00000598115 845 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AF131215.7-201ENST00000602443 707 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AC105129.3-201ENST00000605455 485 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AC092354.1-201ENST00000606057 376 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AC091953.2-201ENST00000623979 160 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 AC120349.3-201ENST00000624377 529 ntBASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAPPC4Q9Y296 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TRAPPC4Q9Y296 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.15□□□□□ -2.06
TRAPPC4Q9Y296 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AL139276.1-201ENST00000311910 1001 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-511P-201ENST00000363496 107 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 RNY3P13-201ENST00000365542 102 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 SNORA51.11-201ENST00000384442 131 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 Y_RNA.560-201ENST00000384689 102 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MTCYBP36-201ENST00000404146 440 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 HMGB3P2-201ENST00000411913 584 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 ELOCP17-201ENST00000414751 326 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MORF4L1P6-201ENST00000418771 268 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 RPL22P17-201ENST00000438729 315 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AL445567.1-201ENST00000439121 144 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 DDX3P2-201ENST00000446138 111 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AL590365.1-201ENST00000450788 243 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MTND1P12-201ENST00000455231 147 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AP001646.1-201ENST00000527936 915 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 MIR3118-1-201ENST00000581787 76 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 DPPA3P3-201ENST00000603842 430 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AL161798.1-201ENST00000604630 131 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC103710.2-201ENST00000609912 942 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC004852.3-201ENST00000614131 326 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC025034.2-201ENST00000623264 286 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AF246928.1-201ENST00000623768 87 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC010149.2-201ENST00000637608 315 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAPPC4Q9Y296 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-1167P-201ENST00000363227 94 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-461P-201ENST00000364195 107 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 MIR767-201ENST00000390228 109 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 MIR888-201ENST00000401186 77 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 NDUFS5P1-201ENST00000405668 289 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNU2-62P-201ENST00000410868 191 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 ELOCP14-201ENST00000428070 331 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 MTND1P28-201ENST00000435623 950 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 ELOCP7-201ENST00000439968 331 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 DPPA3P1-201ENST00000448050 469 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RPL12P25-201ENST00000455592 494 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RBM43P1-201ENST00000476891 1081 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC114797.1-201ENST00000514003 728 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNA5SP290-201ENST00000517133 127 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 RNU1-104P-201ENST00000517280 175 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AP006587.4-201ENST00000526053 529 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AL359999.1-201ENST00000604513 294 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC121334.2-201ENST00000605387 271 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC103810.6-201ENST00000606708 136 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC068057.2-201ENST00000624047 895 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AC243829.7-201ENST00000633081 225 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms