Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDZRN3Q9UPQ7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDZRN3Q9UPQ7 RAD17P1-201ENST00000418130 2042 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AL451142.2-201ENST00000429076 2090 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SNORA25.1-201ENST00000362326 128 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 Y_RNA.262-201ENST00000364641 102 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SNORA71.2-201ENST00000364941 134 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-317P-201ENST00000384031 107 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SNORA70C-201ENST00000384538 135 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 Y_RNA.542-201ENST00000384641 111 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SNORA48.7-201ENST00000391302 135 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AL356387.2-201ENST00000422272 243 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC022034.3-201ENST00000471393 478 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 MIR2116-201ENST00000517221 80 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 ERHP1-201ENST00000523006 310 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AP003327.1-201ENST00000529684 127 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AL133271.1-201ENST00000538229 291 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC015912.2-201ENST00000571053 181 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 MIR5692C2-201ENST00000577959 77 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC022884.3-201ENST00000579571 248 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC006077.1-201ENST00000604746 343 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 U4.7-201ENST00000638126 106 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 MFSD8-242ENST00000641690 4199 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 AC090971.4-201ENST00000560291 1800 ntBASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDZRN3Q9UPQ7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 Y_RNA.412-201ENST00000384001 104 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 SDHCP2-201ENST00000398565 501 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AL390729.2-201ENST00000416137 156 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 MTCO1P44-201ENST00000441935 243 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 EIF4A1P11-201ENST00000451239 222 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 MTATP6P7-201ENST00000453315 681 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 RN7SL303P-201ENST00000469773 251 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC022795.1-201ENST00000473808 480 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 RN7SL817P-201ENST00000480777 288 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC091959.1-201ENST00000495857 238 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 VN1R85P-201ENST00000601587 426 ntBASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDZRN3Q9UPQ7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC083843.3-201ENST00000623679 2186 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RNU1-64P-201ENST00000365443 163 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-45P-201ENST00000384471 107 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RNU1-82P-201ENST00000390851 165 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AL590762.2-201ENST00000395798 571 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RNY4P29-201ENST00000410801 97 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RPS15AP6-201ENST00000420703 385 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 RPL23AP38-201ENST00000423801 469 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 CBX1P4-201ENST00000439415 457 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 UQCRBP2-201ENST00000447827 297 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 FABP5P13-201ENST00000452144 328 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SNORD121B-201ENST00000458838 81 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SNORA27.4-201ENST00000516650 95 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SOD1P3-201ENST00000518682 454 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AP001781.1-201ENST00000530977 207 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 TRAV32-201ENST00000553993 340 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 MIR4659A-201ENST00000580269 81 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 MIR3138-201ENST00000585238 82 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms