Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 RPS29P2-201ENST00000479278 136 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 RN7SL293P-201ENST00000481765 281 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 AC078817.1-201ENST00000492623 435 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 AP005639.2-201ENST00000527592 928 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 CYCSP27-201ENST00000527643 293 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 AC093249.1-201ENST00000567049 203 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 MIR3921-201ENST00000577308 85 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 MIR4790-201ENST00000577799 79 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 uc_338.32-201ENST00000615087 172 ntBASIC4.04□□□□□ -1.76
USP18Q9UMW8 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP18Q9UMW8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP18Q9UMW8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.04□□□□□ -1.76
USP18Q9UMW8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP18Q9UMW8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP18Q9UMW8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP18Q9UMW8 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 SNORD42.2-201ENST00000365570 69 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 RNU6-45P-201ENST00000384471 107 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 U8.11-201ENST00000384699 133 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 U8.12-201ENST00000384701 133 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AL590004.1-201ENST00000405321 300 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 SKA2P1-201ENST00000425592 390 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AP000907.1-201ENST00000428428 510 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 RPL23AP31-201ENST00000456160 467 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 RNU7-152P-201ENST00000458982 64 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 U8.18-201ENST00000459285 133 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC117503.1-201ENST00000472241 394 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AL049874.1-201ENST00000489560 388 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 TBCAP3-201ENST00000512475 312 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 SCARNA15.2-201ENST00000516409 127 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 AP003072.1-201ENST00000531740 145 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 IMMP1LP2-201ENST00000552954 492 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC007151.1-201ENST00000572774 483 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC078795.3-201ENST00000602913 472 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AP001330.4-201ENST00000604350 154 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP18Q9UMW8 MIR7975-201ENST00000619350 68 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.03□□□□□ -1.76
USP18Q9UMW8 MTND4LP32-201ENST00000636111 270 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 OR4G2P-202ENST00000641004 1759 ntBASIC4.03□□□□□ -1.76
USP18Q9UMW8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP18Q9UMW8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
USP18Q9UMW8 ZNF519P1-201ENST00000449011 1626 ntBASIC4.03□□□□□ -1.77
USP18Q9UMW8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.03□□□□□ -1.77
USP18Q9UMW8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP18Q9UMW8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP18Q9UMW8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 UBE2L2-201ENST00000254302 429 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP18Q9UMW8 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 Y_RNA.579-201ENST00000390939 94 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC096664.2-201ENST00000411843 406 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 RPL37P10-201ENST00000412884 288 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AL139396.1-201ENST00000421137 167 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 RPS24P13-201ENST00000442520 397 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 HMGB3P30-201ENST00000457863 606 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 snoU13.4-201ENST00000458916 104 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 Y_RNA.639-201ENST00000458981 102 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC087884.1-201ENST00000469738 328 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 HMGB3P15-201ENST00000507326 574 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC008526.1-201ENST00000509149 338 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 RPL39P5-202ENST00000512505 151 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 RPL23AP94-201ENST00000512518 302 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 RN7SKP24-201ENST00000515888 284 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 RN7SKP289-201ENST00000517244 295 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.02□□□□□ -1.77
USP18Q9UMW8 AL163153.1-201ENST00000554223 283 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AL121821.2-201ENST00000556081 394 ntBASIC4.02□□□□□ -1.77
USP18Q9UMW8 AC020661.2-201ENST00000560114 134 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms