Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL353778.1-201ENST00000603149 408 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL049779.4-201ENST00000604500 156 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC007938.3-201ENST00000604965 623 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC105129.3-201ENST00000605455 485 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC063944.3-201ENST00000609969 533 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC025594.3-201ENST00000613068 790 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC140725.3-201ENST00000616193 880 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC079248.2-201ENST00000623779 326 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC068057.2-201ENST00000624047 895 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC064859.1-201ENST00000624741 174 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC026241.1-201ENST00000517873 2142 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 SNORA25.6-201ENST00000364121 118 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNY4P16-201ENST00000364768 94 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 DEFA7P-201ENST00000382676 285 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNU1-138P-201ENST00000384093 164 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 SNORA41-201ENST00000384675 132 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RPL26P27-201ENST00000414397 437 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 Z99497.1-201ENST00000421282 135 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC009296.1-201ENST00000443146 155 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 FABP5P15-201ENST00000453566 214 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 SSXP1-201ENST00000453640 473 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNU7-125P-201ENST00000458760 62 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 BZW1P2-201ENST00000473537 826 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RPS3AP22-201ENST00000488297 769 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC105252.1-201ENST00000503089 286 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 MTCYBP35-201ENST00000503630 1137 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 MRPS33P3-201ENST00000513456 322 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNU2-10P-201ENST00000516375 211 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 RNU6-232P-201ENST00000517144 64 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC107934.1-201ENST00000522215 217 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC011979.2-201ENST00000527568 352 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC021269.2-201ENST00000532318 330 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AP000860.1-201ENST00000605250 559 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AL360219.1-201ENST00000610230 366 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC013562.2-201ENST00000611632 603 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 DUSP12P1-201ENST00000612874 516 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC006338.1-201ENST00000618453 749 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC079416.3-201ENST00000624479 549 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 U2.21-201ENST00000637295 81 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLCF1Q9UBD9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RNU6-778P-201ENST00000363269 103 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RNU1-73P-201ENST00000383971 164 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RNU6-817P-201ENST00000391083 104 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 MTCYBP36-201ENST00000404146 440 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 FCF1P10-201ENST00000407590 479 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC023141.4-201ENST00000412031 328 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC005005.2-201ENST00000420779 380 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 BPY2DP-201ENST00000422208 265 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RPL36AP53-201ENST00000432891 316 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 UBE2D3P1-201ENST00000436669 444 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC098831.1-201ENST00000440661 216 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 MTND1P12-201ENST00000455231 147 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RNU6-953P-201ENST00000459154 107 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 RPS27AP10-201ENST00000496103 208 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 MRPS36P2-201ENST00000512569 299 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 Y_RNA.717-201ENST00000517106 92 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 LRRC34P1-201ENST00000542742 915 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 GLYCAM1-201ENST00000546596 285 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms