Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRFN1Q9P244 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRFN1Q9P244 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC073346.2-201ENST00000624724 2058 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RNA5SP72-201ENST00000364442 117 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 SNORD37.1-201ENST00000390968 65 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RPL21P90-201ENST00000415692 466 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC011742.1-201ENST00000431448 434 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AL078601.1-201ENST00000444542 271 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RNU7-170P-201ENST00000459303 61 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AL049830.2-201ENST00000480072 201 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC092989.1-201ENST00000481235 277 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC074250.1-201ENST00000511117 192 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RNA5SP401-201ENST00000515920 127 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 RNU6-1183P-201ENST00000517054 60 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 DNAJC8P1-201ENST00000554535 372 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 MTCO3P23-201ENST00000561363 289 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC037471.2-201ENST00000564941 598 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN1Q9P244 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC008669.1-201ENST00000565823 2178 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 AC103988.1-201ENST00000566382 2177 ntBASIC3.41□□□□□ -1.86
LRFN1Q9P244 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LRFN1Q9P244 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LRFN1Q9P244 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
LRFN1Q9P244 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LRFN1Q9P244 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LRFN1Q9P244 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 RNY3P3-201ENST00000363816 102 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 Y_RNA.256-201ENST00000364594 104 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 RNU6-658P-201ENST00000384606 106 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 HLFP1-201ENST00000402375 499 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL078595.1-201ENST00000404458 226 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL606923.1-201ENST00000406616 190 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL353621.1-201ENST00000418219 243 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 MTND1P2-201ENST00000430604 821 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 ATP5JP1-201ENST00000431631 322 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 GTF2IP20-201ENST00000431663 360 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 MTATP6P23-201ENST00000440153 476 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 RPS15AP27-201ENST00000449183 343 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 SCARNA18-201ENST00000459004 134 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC104472.2-201ENST00000469035 601 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC128713.1-201ENST00000471495 306 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 RNU4-29P-201ENST00000515943 174 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 SNORD60.2-201ENST00000516883 86 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC022634.1-201ENST00000520765 532 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 SUB1P1-201ENST00000524415 382 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 MTND1P35-201ENST00000526739 508 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 TRAV37-201ENST00000553906 342 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 CYCSP39-201ENST00000565821 309 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 MIR4782-201ENST00000577987 79 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC073539.2-201ENST00000597113 165 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 uc_338.34-201ENST00000617467 174 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AL356321.1-201ENST00000621360 228 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC079684.1-201ENST00000621405 437 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 AC244205.2-202ENST00000635781 342 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 U6.99-201ENST00000637524 83 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN1Q9P244 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.87
LRFN1Q9P244 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRFN1Q9P244 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC004520.1-201ENST00000608362 1413 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms