Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AL355877.2-201ENST00000603670 358 ntBASIC4.94□□□□□ -1.62
CXXC1Q9P0U4 AC090617.7-201ENST00000623952 126 ntBASIC4.94□□□□□ -1.62
CXXC1Q9P0U4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXXC1Q9P0U4 AC118273.1-201ENST00000525324 3006 ntBASIC4.94□□□□□ -1.62
CXXC1Q9P0U4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXXC1Q9P0U4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 SNORA63.1-201ENST00000362493 131 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 RNU6-140P-201ENST00000384566 108 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 MIR607-201ENST00000385241 96 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 SNORA12.2-201ENST00000391040 156 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 MTCO3P29-201ENST00000432119 779 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AC078817.1-201ENST00000492623 435 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 SNORA31.18-201ENST00000517043 134 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 AC104581.2-201ENST00000572227 430 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 MTND5P6-201ENST00000422338 1798 ntBASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CXXC1Q9P0U4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AP000560.1-201ENST00000624150 1937 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RNU6-212P-201ENST00000362642 104 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.60-201ENST00000362831 98 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 MIR200C-201ENST00000384980 68 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 MIR325-201ENST00000385260 98 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AL117339.2-201ENST00000430475 180 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC007389.2-201ENST00000434630 306 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 LINC01399-202ENST00000458450 244 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RNU7-87P-201ENST00000459343 62 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RPL23AP49-201ENST00000492925 468 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AL359219.2-201ENST00000555184 348 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AC005255.1-201ENST00000593748 216 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RPL23AP78-201ENST00000599928 470 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 AP001273.1-201ENST00000624493 3152 ntBASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXXC1Q9P0U4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 LINC01109-201ENST00000603837 3081 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.405-201ENST00000383979 100 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.451-201ENST00000384200 100 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.478-201ENST00000384358 107 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.524-201ENST00000384564 100 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.561-201ENST00000384694 100 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 Y_RNA.562-201ENST00000384695 113 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 MIR449B-201ENST00000384995 97 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 U3.37-201ENST00000408528 213 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 RPS6P12-201ENST00000432491 726 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 RPL31P13-201ENST00000484151 370 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 RPL30P5-201ENST00000494923 336 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AC025465.3-201ENST00000510570 311 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AC010265.1-201ENST00000513509 211 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 MIR2355-201ENST00000517199 87 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 ZNF192P1-203ENST00000565888 810 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 MIR4286-201ENST00000580651 93 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AC069200.1-201ENST00000609511 323 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 SDR42E1P4-201ENST00000620894 481 ntBASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms