Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 RNU6-701P-201ENST00000384059 107 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 RNU6-757P-201ENST00000410334 100 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC096664.2-201ENST00000411843 406 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 USP9YP6-201ENST00000413550 854 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 UBE2D3P1-201ENST00000436669 444 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC016691.1-201ENST00000441321 413 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC092001.1-201ENST00000453012 261 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 USP9YP25-201ENST00000457708 443 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AL441985.1-201ENST00000457727 251 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 RPL22P13-201ENST00000493291 347 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 RNU6-581P-201ENST00000516214 105 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AP004247.1-201ENST00000531556 1289 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC136618.2-201ENST00000575091 400 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 NRBF2P1-201ENST00000587407 859 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC005000.2-201ENST00000605468 310 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC107214.2-201ENST00000608204 634 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC090970.3-201ENST00000612566 866 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC091965.5-201ENST00000624785 342 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 HSPA8P4-201ENST00000511877 1920 ntBASIC1.93□□□□□ -2.1
CLN6Q9NWW5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.93□□□□□ -2.1
CLN6Q9NWW5 AC104454.1-201ENST00000421341 1401 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 MTATP6P19-201ENST00000413797 659 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC009963.1-201ENST00000417265 157 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 LARP1BP3-201ENST00000437229 869 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 MTND4P25-201ENST00000441039 533 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 NEFMP1-201ENST00000443423 1006 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC124916.1-201ENST00000444020 547 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC068781.1-201ENST00000488231 618 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC096576.1-201ENST00000489014 359 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 RNU6-143P-201ENST00000516942 93 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 RNU6-1183P-201ENST00000517054 60 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AP006587.4-201ENST00000526053 529 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 CBX3P7-201ENST00000532876 502 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 BCRP9-201ENST00000605312 388 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 AP003485.2-201ENST00000623636 610 ntBASIC1.92□□□□□ -2.1
CLN6Q9NWW5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.92□□□□□ -2.1
CLN6Q9NWW5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 RNU6-433P-201ENST00000363216 104 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 RNU6-1176P-201ENST00000390955 107 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 RN7SKP158-201ENST00000410453 326 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 ELOCP9-201ENST00000418624 239 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL592045.1-201ENST00000429867 352 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 RPL7P36-201ENST00000444633 681 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC104685.1-201ENST00000502445 371 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 SMURF2P1-201ENST00000514992 481 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL138976.2-201ENST00000563989 694 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL355472.4-201ENST00000610233 626 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC024581.2-201ENST00000619986 252 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AP003400.5-201ENST00000624827 617 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms