Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 SNORD35B-201ENST00000363660 87 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNA5SP399-201ENST00000364003 117 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNA5SP189-201ENST00000364920 115 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.428-201ENST00000384078 102 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNU6-14P-201ENST00000384630 106 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNVU1-14-201ENST00000384770 164 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNU6-712P-201ENST00000410558 100 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 SSXP9-201ENST00000417503 292 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 USMG5P1-201ENST00000425964 177 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 USP9YP16-201ENST00000430287 407 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 USP9YP30-201ENST00000430729 455 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AL359672.1-201ENST00000442302 409 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 USP9YP23-201ENST00000455085 407 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 SNORD5.1-201ENST00000458800 75 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AP000926.1-201ENST00000479573 241 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 PPIAP15-201ENST00000479662 484 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RN7SL293P-201ENST00000481765 281 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC078918.1-201ENST00000498515 228 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC110794.1-201ENST00000505816 425 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNU6-1095P-201ENST00000516148 108 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RNU6-677P-201ENST00000516914 101 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 SNORD116.3-201ENST00000517176 78 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC087854.1-201ENST00000519706 414 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC011494.1-201ENST00000596454 237 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC018889.1-201ENST00000605372 397 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AL161423.1-201ENST00000613700 262 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 MIR7975-201ENST00000619350 68 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 AC005592.1-201ENST00000566527 1640 ntBASIC4.43□□□□□ -1.7
PDLIM7Q9NR12 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.2-201ENST00000362330 96 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 RNU6-1155P-201ENST00000363554 107 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 RNU6-288P-201ENST00000363690 104 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 SNORA63.7-201ENST00000365579 123 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.476-201ENST00000384347 108 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC090774.1-201ENST00000435925 246 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC083863.1-201ENST00000438811 231 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 MTND4LP22-201ENST00000508209 276 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC104136.1-201ENST00000512969 394 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 IGKV2-38-201ENST00000517443 247 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC007991.1-201ENST00000522680 631 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AP004242.1-201ENST00000533701 349 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC116096.1-201ENST00000566804 2314 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 MYL12BP1-201ENST00000569826 507 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC012119.1-201ENST00000603184 222 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 PRR13P7-201ENST00000605538 430 ntBASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM7Q9NR12 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC138393.1-203ENST00000327086 343 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 RNU6-1059P-201ENST00000363752 98 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 RNU1-115P-201ENST00000365329 160 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.389-201ENST00000383924 113 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 RNU6-214P-201ENST00000384130 107 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 RNU6-45P-201ENST00000384471 107 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms