Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC093106.2-201ENST00000428212 385 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 RPL36AP6-201ENST00000435770 321 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 DDX3P2-201ENST00000446138 111 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC020550.1-201ENST00000447385 163 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 HMGN2P7-201ENST00000456186 273 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC092451.1-201ENST00000480211 153 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 RPL36AP51-201ENST00000487216 318 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 FAM92A1P2-202ENST00000504766 877 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC116562.3-201ENST00000506136 177 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 SLC25A15P5-201ENST00000508033 253 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC117522.1-201ENST00000509821 380 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 SNORA31.8-201ENST00000516327 108 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC068587.5-201ENST00000528506 175 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 OR5D17P-201ENST00000531492 978 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 OR5BN1P-201ENST00000532955 829 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 RPS3AP4-201ENST00000555161 764 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 BDH2P1-201ENST00000602288 736 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC093732.2-201ENST00000607950 274 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC104458.1-201ENST00000608243 463 ntBASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX2Q9NPC8 AL137003.2-201ENST00000606924 2538 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 RNU4-48P-201ENST00000365559 182 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 RNU6-701P-201ENST00000384059 107 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 NDUFS5P1-201ENST00000405668 289 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 OR51A5P-201ENST00000415429 942 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 USP9YP27-201ENST00000418455 438 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL645937.1-202ENST00000421799 937 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC018630.2-202ENST00000422992 927 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL606489.2-201ENST00000433886 234 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 BNIP3P2-201ENST00000441221 577 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC016691.1-201ENST00000441321 413 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL356010.1-201ENST00000456364 102 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 MRPS17P3-201ENST00000465453 385 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 MTAPP1-201ENST00000489154 819 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 RNU6-1281P-201ENST00000516223 105 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 SNORA40.12-201ENST00000516329 111 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 MIR3690-201ENST00000580266 75 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC024619.4-201ENST00000580924 316 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC116096.1-201ENST00000566804 2314 ntBASIC2.92□□□□□ -1.94
SIX2Q9NPC8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
SIX2Q9NPC8 AC093908.1-201ENST00000623125 8092 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 MTND5P17-201ENST00000418405 1603 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL356057.3-201ENST00000402607 340 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 ZNF90P2-204ENST00000419323 1075 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 RNU7-63P-201ENST00000459054 62 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 RNU6-835P-201ENST00000516974 104 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 RN7SKP258-201ENST00000517151 304 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AP006587.4-201ENST00000526053 529 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms