Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 GMPSP1-201ENST00000514075 579 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RN7SKP13-201ENST00000515933 244 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 SCARNA13-201ENST00000516672 275 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AL137161.1-201ENST00000532231 390 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 PSMA3P-201ENST00000555485 635 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC009248.2-201ENST00000619826 254 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 MTND5P42-201ENST00000637720 498 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 MTND4P35-201ENST00000604257 1375 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 RNU6-50P-201ENST00000362356 103 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 Y_RNA.142-201ENST00000363491 102 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 RBMY2UP-201ENST00000453474 324 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 RPL23AP31-201ENST00000456160 467 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 RN7SL807P-201ENST00000470923 297 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 SNORA70.19-201ENST00000516717 90 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AL355836.1-201ENST00000555951 870 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AL442067.2-201ENST00000614033 363 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 uc_338.34-201ENST00000617467 174 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AC022140.2-201ENST00000623500 188 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AL359697.1-201ENST00000624879 587 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
USP29Q9HBJ7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP29Q9HBJ7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AL672296.1-201ENST00000427780 2158 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU5A-1-201ENST00000362698 116 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 MIR514A1-201ENST00000385133 98 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU6-817P-201ENST00000391083 104 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 CALM2P2-201ENST00000428512 440 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC097713.2-201ENST00000430199 356 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AL590639.1-201ENST00000456484 337 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RPL21P8-201ENST00000465083 535 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 MTND3P22-201ENST00000510932 243 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 TTC39CP1-201ENST00000512513 755 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RNU6-927P-201ENST00000516199 100 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 MTND4P7-201ENST00000523876 130 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 RANP3-201ENST00000530970 276 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC037471.2-201ENST00000564941 598 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AP001330.4-201ENST00000604350 154 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC009233.1-201ENST00000616477 371 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AL355365.1-201ENST00000616480 294 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC005858.4-201ENST00000623191 700 ntBASIC3.56□□□□□ -1.84
USP29Q9HBJ7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP29Q9HBJ7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.55□□□□□ -1.84
USP29Q9HBJ7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP29Q9HBJ7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms