Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AL121917.1-203ENST00000605534 577 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AL591516.1-201ENST00000611326 274 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AL021997.2-201ENST00000615674 271 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AL138825.1-201ENST00000618587 192 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AL512643.1-201ENST00000635735 524 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 Z99571.1-201ENST00000636677 394 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SEC61A2Q9H9S3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SEC61A2Q9H9S3 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 AL451142.2-201ENST00000429076 2090 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 Z82217.1-201ENST00000625157 8149 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.14-201ENST00000362415 103 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 SNORA20.1-201ENST00000364790 130 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-933P-201ENST00000384424 107 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 MIR153-1-201ENST00000384914 90 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 SNORD66.1-201ENST00000391230 76 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-607P-201ENST00000411283 108 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RPL7P2-201ENST00000427639 268 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RPL23AP52-201ENST00000439311 478 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 DAP3P1-201ENST00000441522 278 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RN7SL98P-201ENST00000462271 300 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 RPS15AP34-201ENST00000487776 387 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 HMGB3P17-201ENST00000504195 649 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 SNORA25.11-201ENST00000515935 105 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.673-201ENST00000516306 88 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 IFITM8P-201ENST00000522529 394 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 OR5D17P-201ENST00000531492 978 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 TRAV8-5-201ENST00000537369 341 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 AC083809.1-201ENST00000615051 472 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 uc_338.13-201ENST00000618243 179 ntBASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
SEC61A2Q9H9S3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC090971.4-201ENST00000560291 1800 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 MTND5P6-201ENST00000422338 1798 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 UBE2L2-201ENST00000254302 429 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-770P-201ENST00000363929 105 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-512P-201ENST00000364438 103 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-596P-201ENST00000365395 98 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AL513475.1-201ENST00000406602 315 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU2-64P-201ENST00000411315 191 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC092423.1-201ENST00000430165 186 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RPS29P17-201ENST00000430795 166 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 ABCF2P2-201ENST00000450549 296 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 VN1R104P-201ENST00000505115 1009 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC093840.1-201ENST00000511599 336 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU1-86P-201ENST00000516108 154 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU1-107P-201ENST00000516617 154 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNU7-4P-201ENST00000516961 62 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RNA5SP471-201ENST00000516971 106 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 MIR4284-201ENST00000578924 81 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 BDH2P1-201ENST00000602288 736 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AL158827.2-201ENST00000602494 330 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC064801.1-201ENST00000612025 407 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC141273.2-201ENST00000618989 130 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AL691447.3-201ENST00000635020 330 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 MIR4275-201ENST00000636486 87 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 AC005183.1-201ENST00000603687 1979 ntBASIC3.82□□□□□ -1.8
SEC61A2Q9H9S3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms