Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC68Q9H2F9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CCDC68Q9H2F9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 ASNSP3-201ENST00000451989 1306 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RNU6-179P-201ENST00000363350 107 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 SNORD67-201ENST00000390833 111 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AL513475.1-201ENST00000406602 315 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RNU6-248P-201ENST00000410720 107 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AL078601.1-201ENST00000444542 271 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AP000936.2-201ENST00000447151 681 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC092001.1-201ENST00000453012 261 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RN7SL807P-201ENST00000470923 297 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC107626.1-201ENST00000471084 183 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC004924.1-201ENST00000480160 781 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC116562.3-201ENST00000506136 177 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC074250.1-201ENST00000511117 192 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RNU6-581P-201ENST00000516214 105 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 Y_RNA.688-201ENST00000516565 95 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 RNU6-410P-201ENST00000517006 107 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC090572.1-201ENST00000519251 160 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC068587.5-201ENST00000528506 175 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC090616.3-201ENST00000582184 217 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC098848.2-201ENST00000588023 330 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 NRBF2P5-201ENST00000603087 788 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC245014.2-201ENST00000603689 287 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AC246785.4-201ENST00000605374 287 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AL589743.7-201ENST00000612637 233 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 CU459211.1-201ENST00000635667 749 ntBASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC68Q9H2F9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RNU6-461P-201ENST00000364195 107 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RNU6-19P-201ENST00000384718 107 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RNA5SP111-201ENST00000411386 101 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC092427.1-202ENST00000430569 476 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 MTATP6P16-201ENST00000434543 526 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RPS20P5-201ENST00000434808 360 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AL353706.1-201ENST00000436728 494 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC003071.1-201ENST00000451219 789 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC080014.1-201ENST00000496877 1201 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AIG1P1-201ENST00000503376 148 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC091152.3-201ENST00000604227 325 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 MIR92B-201ENST00000607575 96 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC100793.4-201ENST00000613683 429 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AC025034.2-201ENST00000623264 286 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AL157786.1-207ENST00000627771 695 ntBASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC68Q9H2F9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 SNORA71.3-201ENST00000362582 128 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 RNU6-898P-201ENST00000365627 104 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 Z98749.2-208ENST00000381646 500 ntBASIC3.02□□□□□ -1.93
CCDC68Q9H2F9 MIR147B-201ENST00000390185 80 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms