Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC011939.3-201ENST00000613686 466 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 AC027807.2-201ENST00000616099 408 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 AC007998.5-201ENST00000622938 237 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 Z99571.1-201ENST00000636677 394 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 ADAM3A-203ENST00000461344 2157 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
DDX47Q9H0S4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
DDX47Q9H0S4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
DDX47Q9H0S4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.57□□□□□ -2
DDX47Q9H0S4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.57□□□□□ -2
DDX47Q9H0S4 RNU7-125P-201ENST00000458760 62 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AL121769.1-201ENST00000469473 401 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 RPL30P6-201ENST00000475925 342 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AP000797.1-201ENST00000478870 387 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.57□□□□□ -2
DDX47Q9H0S4 MTCYBP35-201ENST00000503630 1137 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.57□□□□□ -2
DDX47Q9H0S4 RNU2-10P-201ENST00000516375 211 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 SNORD19.2-201ENST00000516978 73 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AP003181.2-201ENST00000528941 181 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
DDX47Q9H0S4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.57□□□□□ -2
DDX47Q9H0S4 AC008015.1-201ENST00000555505 465 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC007938.3-201ENST00000604965 623 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AL031775.1-201ENST00000607014 887 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC138749.5-201ENST00000611461 208 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC140725.3-201ENST00000616193 880 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC116165.2-201ENST00000616705 206 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
DDX47Q9H0S4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
DDX47Q9H0S4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DDX47Q9H0S4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
DDX47Q9H0S4 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNU4-1-201ENST00000363925 141 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 SNORA80E-201ENST00000384744 137 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC004263.1-201ENST00000479327 332 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNU6-143P-201ENST00000516942 93 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNA5SP337-201ENST00000517007 109 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC009902.1-201ENST00000519351 183 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC011979.2-201ENST00000527568 352 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.56□□□□□ -2
DDX47Q9H0S4 ELOCP29-201ENST00000588193 334 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC091152.3-201ENST00000604227 325 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AL359999.1-201ENST00000604513 294 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC009159.2-201ENST00000617603 606 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC079248.2-201ENST00000623779 326 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC006386.2-201ENST00000624491 75 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC012005.1-201ENST00000624575 75 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC008993.2-201ENST00000631744 806 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.56□□□□□ -2
DDX47Q9H0S4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.56□□□□□ -2
DDX47Q9H0S4 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
DDX47Q9H0S4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 RNU5F-7P-201ENST00000363696 115 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 RNU6-946P-201ENST00000383878 107 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC092809.3-201ENST00000415453 231 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AL591212.2-201ENST00000433923 257 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AL161651.1-201ENST00000440882 223 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 BRK1P2-201ENST00000442875 223 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.55□□□□□ -2
DDX47Q9H0S4 RNU6-677P-201ENST00000516914 101 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms