Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-874P-201ENST00000362390 105 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU1-33P-201ENST00000364249 162 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RHOT1P2-201ENST00000366423 333 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-821P-201ENST00000390995 107 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-823P-201ENST00000391042 103 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 MIR548M-201ENST00000408260 86 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-55P-201ENST00000411092 107 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 EIF4EP1-201ENST00000422311 642 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 UBE2V1P4-201ENST00000425374 344 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC093106.2-201ENST00000428212 385 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC104472.2-201ENST00000469035 601 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-408P-201ENST00000515910 100 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-1143P-201ENST00000516125 104 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC022882.1-201ENST00000532142 501 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 Z98751.3-201ENST00000604447 521 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AL161423.1-201ENST00000613700 262 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 CDC27P3-201ENST00000635418 1910 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 SAMMSON-213ENST00000641336 1521 ntBASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CNTNAP4Q9C0A0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 SNORD9-201ENST00000362566 104 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 Y_RNA.480-201ENST00000384364 102 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 MT-TC-201ENST00000387405 66 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 MIR1250-201ENST00000408098 113 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC073063.1-201ENST00000434352 607 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 RBMY2UP-201ENST00000453474 324 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 RPL37P6-201ENST00000460682 294 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC010631.1-201ENST00000474150 156 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 RPL21P103-201ENST00000479921 488 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC026784.1-201ENST00000507986 352 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 RN7SKP83-201ENST00000516512 178 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC007375.1-201ENST00000554513 578 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 RPL23AP84-201ENST00000571193 464 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AL359893.1-201ENST00000447628 1580 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 AL365440.1-201ENST00000436135 2167 ntBASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP4Q9C0A0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 Y_RNA.2-201ENST00000362330 96 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AC019155.1-201ENST00000382242 574 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 RPL21P109-201ENST00000422213 475 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AL590632.1-201ENST00000424289 371 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AC011816.1-201ENST00000441346 546 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 BX276092.4-201ENST00000452056 248 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AC112492.4-201ENST00000456549 352 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 HMGB1P25-201ENST00000468402 607 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AC117503.1-201ENST00000472241 394 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 VN1R104P-201ENST00000505115 1009 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 Y_RNA.680-201ENST00000516441 93 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 SCARNA16.2-201ENST00000516520 172 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 RN7SKP57-201ENST00000517248 293 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 HMGN2P28-201ENST00000606102 262 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 MTND5P7-201ENST00000413558 1798 ntBASIC4.76□□□□□ -1.65
CNTNAP4Q9C0A0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP4Q9C0A0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP4Q9C0A0 RNA5SP50-201ENST00000363731 107 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms