Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AL606923.1-201ENST00000406616 190 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RPL30P2-201ENST00000414021 291 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 CKS1BP6-201ENST00000424932 240 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RPS3AP52-201ENST00000435639 297 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC005019.1-201ENST00000436455 431 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC069285.2-201ENST00000440210 275 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RPL21P99-201ENST00000480369 423 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RPL30P5-201ENST00000494923 336 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC097462.2-201ENST00000504623 481 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 HMGB3P15-201ENST00000507326 574 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 FAM206BP-201ENST00000510179 541 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RNU6-123P-201ENST00000516163 102 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 RANP9-201ENST00000519957 271 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AP005435.4-201ENST00000529514 284 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC103843.2-201ENST00000530523 682 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC004024.1-201ENST00000549244 247 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC124312.5-201ENST00000604451 268 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AL670379.4-201ENST00000605279 254 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC022893.3-201ENST00000607665 437 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 uc_338.15-201ENST00000615470 191 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 FAM35BP-202ENST00000497389 3337 ntBASIC3.92□□□□□ -1.78
LRFN3Q9BTN0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 UBE2L2-201ENST00000254302 429 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNA5SP374-201ENST00000362939 125 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 SNORA22B-201ENST00000383876 138 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-639P-201ENST00000384074 107 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-38P-201ENST00000384085 107 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-574P-201ENST00000384265 107 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MIR493-201ENST00000385254 89 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MIR301A-201ENST00000385261 86 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-907P-201ENST00000390924 102 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNY4P36-201ENST00000391116 96 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU2-33P-201ENST00000410344 192 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MIR1911-201ENST00000410783 80 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU4-14P-201ENST00000410858 122 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RN7SKP53-201ENST00000411337 315 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNA5SP111-201ENST00000411386 101 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 HMGN2P16-201ENST00000456802 261 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AL162395.1-201ENST00000457882 422 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RNU6-333P-201ENST00000459117 107 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC012181.1-201ENST00000479895 423 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AP001086.1-201ENST00000494882 321 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MTCO1P29-201ENST00000496868 288 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC092436.1-201ENST00000506450 503 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC021146.3-201ENST00000511911 260 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 APOOP4-201ENST00000513530 597 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RPL7P20-201ENST00000520308 745 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC090151.1-201ENST00000520784 730 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 ZNF192P1-203ENST00000565888 810 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 RPL23AP97-201ENST00000568955 471 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AL162274.2-201ENST00000614406 332 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC002546.1-201ENST00000588041 2504 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 DHX9P1-201ENST00000436565 3076 ntBASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
LRFN3Q9BTN0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
LRFN3Q9BTN0 MAPK10-303ENST00000641324 3959 ntBASIC3.9□□□□□ -1.78
LRFN3Q9BTN0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN3Q9BTN0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN3Q9BTN0 AC007785.2-201ENST00000598627 1916 ntBASIC3.9□□□□□ -1.78
LRFN3Q9BTN0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms