Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-1032P-201ENST00000384100 107 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 MIR16-1-201ENST00000385271 89 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RPL26P27-201ENST00000414397 437 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 OR51A5P-201ENST00000415429 942 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC019178.2-201ENST00000423595 505 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 NANOGP2-201ENST00000435391 727 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 PTGES3P1-201ENST00000439531 483 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC092170.1-201ENST00000440211 356 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 MTCO1P44-201ENST00000441935 243 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RPS29P28-201ENST00000446439 141 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RPL23AP23-201ENST00000452590 471 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RPS26P55-201ENST00000471178 356 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC025465.3-201ENST00000510570 311 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 NRON-201ENST00000517270 370 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RAB11AP2-201ENST00000545905 639 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC068338.1-201ENST00000565567 176 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC012414.6-201ENST00000568241 401 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AL355802.4-201ENST00000607635 548 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AC239868.4-201ENST00000608318 671 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AL118556.2-201ENST00000614375 824 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 AP001002.2-201ENST00000625137 386 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 SGO1P1-201ENST00000603525 1447 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
VPS25Q9BRG1 ZNF849P-201ENST00000594711 1566 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 RNA5SP100-201ENST00000410903 110 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 RNA5SP59-201ENST00000410922 110 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC127391.1-201ENST00000411737 98 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 PTGES3P4-201ENST00000426243 356 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AL354695.1-201ENST00000427935 228 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 MTCO1P57-201ENST00000432182 261 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC010153.1-201ENST00000432862 727 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 SNRPEP9-201ENST00000436794 238 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 SSXP1-201ENST00000453640 473 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 USP9YP34-201ENST00000453983 808 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 RPL32P14-201ENST00000463196 378 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 RPL36AP48-201ENST00000485521 314 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC011005.2-201ENST00000487324 359 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 OR5B19P-201ENST00000531766 928 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 NIFKP6-201ENST00000598115 845 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC004805.2-201ENST00000605382 482 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 NDUFA8P1-201ENST00000605525 367 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC011939.3-201ENST00000613686 466 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AL590396.4-201ENST00000636779 956 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
VPS25Q9BRG1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 RNU6-203P-201ENST00000384038 104 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AL590233.1-201ENST00000430017 456 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC245102.2-201ENST00000448956 180 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 MTCYBP16-201ENST00000509187 1129 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 COPS8P3-201ENST00000526024 482 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC079598.5-201ENST00000547460 117 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 EIF4BP1-201ENST00000554881 351 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
VPS25Q9BRG1 SNORD53B-201ENST00000577887 78 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 BNIP3P24-201ENST00000593398 557 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC080188.3-201ENST00000624842 748 ntBASIC0.86□□□□□ -2.27
VPS25Q9BRG1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MIR23B-201ENST00000384832 97 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MIR491-201ENST00000384877 84 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MIR517C-201ENST00000385103 95 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RNA5SP171-201ENST00000391071 115 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 CCNG1P1-201ENST00000406783 885 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MIR1323-201ENST00000408090 73 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RNU2-28P-201ENST00000410457 189 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AL353621.1-201ENST00000418219 243 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC092634.6-201ENST00000418558 192 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 Z98742.3-201ENST00000418637 326 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 CST2P1-201ENST00000425770 87 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms