Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC025594.3-201ENST00000613068 790 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 MIR607-201ENST00000385241 96 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 VPS26BP1-201ENST00000417155 755 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC098862.1-201ENST00000504991 413 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.44□□□□□ -2.34
COL12A1Q99715 TPT1P8-201ENST00000510120 555 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 Y_RNA.659-201ENST00000515994 113 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 MIR3117-201ENST00000584034 78 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AL109918.3-201ENST00000603072 338 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC024060.1-201ENST00000607052 494 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AL592148.2-201ENST00000612210 372 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC109454.4-201ENST00000623411 649 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
COL12A1Q99715 RNU4-67P-201ENST00000364569 141 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 SNORA22-201ENST00000383907 134 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 SNORA22C-201ENST00000384614 134 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 MIR515-2-201ENST00000384883 83 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 MIR515-1-201ENST00000384884 83 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AL356776.1-201ENST00000406574 447 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 RN7SKP142-201ENST00000411236 328 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 RPL31P60-201ENST00000478450 367 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC245128.3-201ENST00000594721 748 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC108676.2-201ENST00000605225 163 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.44□□□□□ -2.34
COL12A1Q99715 RNU4-73P-201ENST00000363164 141 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.43□□□□□ -2.34
COL12A1Q99715 AC004865.1-201ENST00000442276 1003 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 CABYRP1-201ENST00000465493 1045 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AC055731.1-201ENST00000474387 401 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
COL12A1Q99715 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.43□□□□□ -2.34
COL12A1Q99715 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
COL12A1Q99715 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.43□□□□□ -2.34
COL12A1Q99715 COX6CP3-201ENST00000580869 223 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AC078899.2-201ENST00000595282 212 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AL391516.1-201ENST00000554380 2449 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 MIR101-1-201ENST00000362265 75 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 RPL39P28-201ENST00000465655 155 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 Y_RNA.684-201ENST00000516510 99 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 SNORD39.2-201ENST00000579995 76 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AC073111.2-201ENST00000605657 1075 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AC103710.4-201ENST00000609301 899 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.43□□□□□ -2.34
COL12A1Q99715 AP000776.1-201ENST00000530032 1663 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AC087359.1-201ENST00000508335 1740 ntBASIC0.43□□□□□ -2.34
COL12A1Q99715 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.42□□□□□ -2.34
COL12A1Q99715 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.42□□□□□ -2.34
COL12A1Q99715 RSL24D1P8-201ENST00000434442 492 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AC009296.1-201ENST00000443146 155 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AL353898.1-201ENST00000444055 238 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 OR6C72P-201ENST00000451403 892 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AL031183.1-201ENST00000457667 207 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.42□□□□□ -2.34
COL12A1Q99715 AC010627.1-201ENST00000503819 1294 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AC021146.2-201ENST00000504736 556 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 FAM206BP-201ENST00000510179 541 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AC130454.1-201ENST00000622948 401 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
COL12A1Q99715 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
COL12A1Q99715 SNORA51.6-201ENST00000384151 125 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 RNU6-225P-201ENST00000384613 103 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 MRPL35P1-201ENST00000404272 572 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.42□□□□□ -2.34
COL12A1Q99715 RNU2-19P-201ENST00000517288 84 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AL136313.1-201ENST00000624804 202 ntBASIC0.42□□□□□ -2.34
COL12A1Q99715 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.42□□□□□ -2.34
COL12A1Q99715 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.42□□□□□ -2.34
COL12A1Q99715 MIR126-201ENST00000362291 85 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 RNU6-600P-201ENST00000362524 99 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 SNORA36.1-201ENST00000363424 132 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 Y_RNA.514-201ENST00000384528 112 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AL133384.1-201ENST00000412744 351 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AC093770.1-201ENST00000511559 571 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.41□□□□□ -2.34
COL12A1Q99715 MIR4529-201ENST00000578110 78 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AP001485.1-201ENST00000604799 199 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
COL12A1Q99715 RNU6-989P-201ENST00000362756 107 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 RNU1-72P-201ENST00000362976 153 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 Y_RNA.293-201ENST00000364908 93 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 RNU4-65P-201ENST00000410473 140 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 MRPL35P3-201ENST00000421557 364 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.41□□□□□ -2.34
COL12A1Q99715 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.41□□□□□ -2.34
COL12A1Q99715 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.41□□□□□ -2.34
COL12A1Q99715 AC135507.1-201ENST00000607214 561 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AC093788.1-201ENST00000609356 927 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 MIR601-201ENST00000385256 79 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 RNA5SP212-201ENST00000391223 107 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.41□□□□□ -2.34
COL12A1Q99715 NF1P3-201ENST00000457709 450 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AC023050.1-201ENST00000498198 304 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.41□□□□□ -2.34
COL12A1Q99715 AL121839.1-201ENST00000556233 1185 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.41□□□□□ -2.34
COL12A1Q99715 AC008751.2-201ENST00000597885 980 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 AC013470.4-201ENST00000619978 986 ntBASIC0.41□□□□□ -2.34
COL12A1Q99715 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms