Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ELL2P3-201ENST00000457883 1602 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 SNORA38-201ENST00000363946 132 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 SMIM11P1-201ENST00000369586 178 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 RNU6-701P-201ENST00000384059 107 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 SNORA44-201ENST00000384584 132 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 RNY3P9-201ENST00000384727 106 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 SNORA48.2-201ENST00000390926 124 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 UBE2V1P2-201ENST00000397758 440 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL356057.3-201ENST00000402607 340 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 FCF1P10-201ENST00000407590 479 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 HMGN1P14-201ENST00000412459 517 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 MTND1P21-201ENST00000412991 285 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 MED14P1-201ENST00000430517 648 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 RPL22P17-201ENST00000438729 315 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 RPS15AP9-201ENST00000439856 381 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 BNIP3P2-201ENST00000441221 577 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL135938.1-201ENST00000443141 297 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC009237.8-201ENST00000445492 379 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 MTATP6P26-201ENST00000445926 662 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL360221.1-201ENST00000445989 335 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 DDX3P2-201ENST00000446138 111 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC020550.1-201ENST00000447385 163 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00477Q96M19 SSXP1-201ENST00000453640 473 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 RNU7-59P-201ENST00000459101 61 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 EIF4EP3-201ENST00000498782 656 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC105252.1-201ENST00000503089 286 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC010587.1-201ENST00000505809 469 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 RNU6-390P-201ENST00000516259 103 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 SCARNA15.2-201ENST00000516409 127 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 RNU6-840P-201ENST00000517275 65 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AP006587.4-201ENST00000526053 529 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC022878.1-201ENST00000530684 149 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 ELOCP29-201ENST00000588193 334 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC007363.1-201ENST00000604736 620 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL451064.1-201ENST00000607718 471 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AL158063.1-201ENST00000615349 536 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 U4.3-201ENST00000621047 82 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC025048.6-202ENST00000627667 438 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC010149.2-201ENST00000637608 315 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00477Q96M19 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 DDX10P1-201ENST00000448545 1933 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00477Q96M19 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LINC00477Q96M19 AC005832.2-201ENST00000538921 1430 ntBASIC1.91□□□□□ -2.1
LINC00477Q96M19 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
LINC00477Q96M19 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 Y_RNA.22-201ENST00000362492 102 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 SNORD62.1-201ENST00000362541 86 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 Y_RNA.51-201ENST00000362725 102 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 RNA5SP456-201ENST00000364002 114 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 RNU4-75P-201ENST00000364621 146 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 RNY3P10-201ENST00000384764 102 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 SNORA40.3-201ENST00000390964 122 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 TXNP7-201ENST00000406296 293 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 RPS3AP3-201ENST00000411933 242 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 RPL17P12-201ENST00000413391 526 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 SPA17P1-201ENST00000416656 452 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AL589823.1-201ENST00000429577 183 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 VN1R108P-201ENST00000431580 830 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC009961.2-201ENST00000435771 251 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 PIGFP3-201ENST00000441918 722 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 CBWD4P-201ENST00000445695 655 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 GAPDHP17-201ENST00000449858 1001 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 RPL12P25-201ENST00000455592 494 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC107626.1-201ENST00000471084 183 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC011825.1-201ENST00000484967 388 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms