Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 POLHP1-201ENST00000411806 470 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 UBE2FP1-201ENST00000416536 447 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC019097.1-201ENST00000424783 735 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AP000542.1-201ENST00000448473 371 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 RPS3P1-201ENST00000456781 192 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 RPS15AP36-201ENST00000492022 382 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 RNA5SP216-201ENST00000516111 123 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 MIR4509-3-201ENST00000578671 94 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 MIR4509-2-201ENST00000583920 94 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 BNIP3P22-201ENST00000593399 556 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC091057.3-201ENST00000602684 733 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC005014.3-201ENST00000605985 190 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AL157392.4-201ENST00000609756 345 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 MIR4509-1-201ENST00000618224 94 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 AC099654.9-201ENST00000637055 678 ntBASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PKNOX2Q96KN3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PKNOX2Q96KN3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 RNU6-462P-201ENST00000362659 105 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 RNU6-853P-201ENST00000364306 107 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 RNA5SP363-201ENST00000365072 115 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 RNU6-19P-201ENST00000384718 107 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 MIR320C1-201ENST00000408566 88 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 MTCO1P17-201ENST00000411522 491 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC083875.1-201ENST00000419509 405 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 MTCO3P45-201ENST00000443036 613 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC055855.1-201ENST00000489563 579 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC034222.1-201ENST00000494052 532 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC096745.1-201ENST00000509945 370 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 GTF3AP2-201ENST00000557014 266 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC060771.1-201ENST00000582031 164 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AF038458.1-201ENST00000588406 262 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AL357094.1-201ENST00000603845 844 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 AC112220.3-201ENST00000605502 502 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 RNU4-5P-201ENST00000607255 135 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PKNOX2Q96KN3 OR5J1P-201ENST00000313544 939 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 CCNG1P1-201ENST00000406783 885 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 SNORA11.1-201ENST00000408133 129 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 TXNL1P1-201ENST00000429528 554 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 MTCO2P20-201ENST00000437339 673 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 RPL7P18-201ENST00000478965 734 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 CKS1BP2-201ENST00000497342 240 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 HMGB1P35-201ENST00000503360 598 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC110760.3-202ENST00000515177 371 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC024619.4-201ENST00000580924 316 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 VN1R92P-201ENST00000598511 928 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC080013.3-201ENST00000606839 578 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC239868.4-201ENST00000608318 671 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX2Q96KN3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 MIR128-1-201ENST00000384921 82 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 RN7SKP266-201ENST00000410232 287 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 HMGB1P11-201ENST00000413899 637 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC092648.1-201ENST00000425870 423 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 RSU1P2-202ENST00000437884 485 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC107083.1-201ENST00000439643 279 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AL160314.1-201ENST00000490836 438 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms