Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TAAR7P-201ENST00000436141 242 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 RPL21P23-201ENST00000446654 460 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AL590664.1-201ENST00000448065 339 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 TRBV1-201ENST00000476502 284 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC025518.1-201ENST00000479856 347 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MTCO2P30-201ENST00000503662 364 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MTCO3P9-201ENST00000506989 781 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-1038P-201ENST00000516516 104 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.702-201ENST00000516843 96 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 ATP5F1P5-201ENST00000526403 760 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 BNIP3P6-201ENST00000549284 499 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC078814.3-201ENST00000553036 491 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 TGIF1P1-201ENST00000558095 802 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC107294.1-201ENST00000609524 467 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC032011.1-201ENST00000611703 1549 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AL513302.2-201ENST00000562313 1842 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-741P-201ENST00000383889 107 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AL162578.1-201ENST00000406202 378 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.615-201ENST00000410769 117 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC098614.3-201ENST00000438957 440 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 PIGFP3-201ENST00000441918 722 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 SCARNA18-201ENST00000459004 134 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 HMGN2P26-201ENST00000463169 339 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 KC877373.1-201ENST00000479066 408 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AL160314.1-201ENST00000490836 438 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC008628.2-201ENST00000502605 298 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC091885.1-201ENST00000506658 268 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC010265.1-201ENST00000513509 211 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-143P-201ENST00000516942 93 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 RNA5SP291-201ENST00000517222 105 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC107934.2-201ENST00000518653 310 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AC018638.8-201ENST00000588755 281 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 MTND1P37-201ENST00000636562 264 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 Z99571.1-201ENST00000636677 394 ntBASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP3Q96JB5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AL592114.1-201ENST00000403842 483 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 CCDC34P1-201ENST00000507441 517 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 LRRC34P2-201ENST00000514850 553 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 RNA5SP290-201ENST00000517133 127 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC023050.3-201ENST00000541142 333 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC106782.4-201ENST00000568264 210 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC011712.1-201ENST00000588959 234 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 U3.45-201ENST00000607547 219 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC090617.10-201ENST00000624308 134 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AL512643.1-201ENST00000635735 524 ntBASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP3Q96JB5 HSPA8P4-201ENST00000511877 1920 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RNU4-35P-201ENST00000362588 141 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.72-201ENST00000362894 103 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.245-201ENST00000364493 95 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 SNORA73.2-201ENST00000364946 201 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-1127P-201ENST00000384580 107 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.534-201ENST00000384599 112 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 MIR325-201ENST00000385260 98 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RNU1-101P-201ENST00000391171 127 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RNU4-26P-201ENST00000410270 107 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RNU2-33P-201ENST00000410344 192 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 Z99755.1-201ENST00000414048 380 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC017079.2-201ENST00000416102 485 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC009161.1-201ENST00000417306 376 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 HMGN2P31-201ENST00000432430 273 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AL591704.1-201ENST00000432574 275 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms