Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL358232.1-201ENST00000448030 501 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 AP001880.2-201ENST00000538233 448 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 MIR4444-1-201ENST00000581696 74 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 MIR4444-2-201ENST00000584390 74 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 AL596275.2-206ENST00000641957 626 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 RNU6-235P-201ENST00000362644 107 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 RN7SKP185-201ENST00000362813 326 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 RNY1P11-201ENST00000363759 113 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 SNORA25.7-201ENST00000364375 127 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 RNU4-10P-201ENST00000364383 140 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 Y_RNA.595-201ENST00000410403 105 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AIMP1P2-201ENST00000425294 312 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC007560.1-201ENST00000426912 237 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC092754.1-201ENST00000472975 479 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 HSPE1P6-201ENST00000479457 291 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 RN7SKP276-201ENST00000516242 268 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AP001781.1-201ENST00000530977 207 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 MIR3158-1-201ENST00000583596 81 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC006130.2-201ENST00000586202 326 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC091932.3-201ENST00000624223 323 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AC068647.2-201ENST00000637380 353 ntBASIC5.57□□□□□ -1.52
LRCH3Q96II8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRCH3Q96II8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRCH3Q96II8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC068700.1-201ENST00000565862 3754 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 SAGE2P-201ENST00000420011 2126 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 MIR1250-201ENST00000408098 113 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 BPY2DP-201ENST00000422208 265 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC091390.3-201ENST00000426478 338 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RPL23AP83-201ENST00000434984 473 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RNU6-625P-201ENST00000459412 107 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RN7SL319P-201ENST00000480656 221 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RPL31P61-201ENST00000496160 376 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RNU6-772P-201ENST00000516042 105 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RNA5SP43-201ENST00000516559 110 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC116447.1-201ENST00000613153 453 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC004467.1-201ENST00000615678 330 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRCH3Q96II8 AC112200.1-201ENST00000625015 234 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 U6.95-201ENST00000636931 70 ntBASIC5.56□□□□□ -1.52
LRCH3Q96II8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRCH3Q96II8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRCH3Q96II8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LRCH3Q96II8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRCH3Q96II8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 Z95114.1-201ENST00000624264 14574 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNA5SP326-201ENST00000363209 110 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNU6-915P-201ENST00000364943 103 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNU6-32P-201ENST00000383948 107 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNU6-13P-201ENST00000384248 107 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNU6-12P-201ENST00000384604 107 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 RNU6-41P-201ENST00000384741 107 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 MIR888-201ENST00000401186 77 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 REG1CP-206ENST00000447469 496 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 SNRPCP3-201ENST00000474888 476 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AL049874.1-201ENST00000489560 388 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 GLUD1P3-202ENST00000508551 200 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AC027369.5-201ENST00000533838 755 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms