Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF34Q969K3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
RNF34Q969K3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF34Q969K3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF34Q969K3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF34Q969K3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-778P-201ENST00000363269 103 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-884P-201ENST00000363889 107 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-827P-201ENST00000365553 106 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU1-73P-201ENST00000383971 164 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-574P-201ENST00000384265 107 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 SNORA75.6-201ENST00000391318 127 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 SNORA11F-201ENST00000408237 128 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 HSPE1P12-201ENST00000412576 301 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF34Q969K3 AL159987.2-201ENST00000432754 307 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC007389.2-201ENST00000434630 306 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 DAP3P1-201ENST00000441522 278 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AL035666.1-201ENST00000446195 348 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-120P-201ENST00000516077 103 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 RNU6-976P-201ENST00000516086 111 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 Y_RNA.687-201ENST00000516558 91 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF34Q969K3 LINC00933-203ENST00000559812 219 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AMZ2P1-203ENST00000565833 850 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF34Q969K3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF34Q969K3 AL121655.1-201ENST00000605811 308 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC011890.2-201ENST00000613393 294 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC011944.2-201ENST00000624440 683 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC140479.6-201ENST00000633535 357 ntBASIC4.53□□□□□ -1.68
RNF34Q969K3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF34Q969K3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF34Q969K3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
RNF34Q969K3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF34Q969K3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF34Q969K3 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 RNA5SP22-201ENST00000365393 109 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 Y_RNA.605-201ENST00000410577 105 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 MIR1911-201ENST00000410783 80 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC009237.10-201ENST00000414112 510 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF34Q969K3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF34Q969K3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF34Q969K3 RPL23AP52-201ENST00000439311 478 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 FTH1P25-201ENST00000447665 469 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AL451050.1-201ENST00000450126 415 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF34Q969K3 RN7SL303P-201ENST00000469773 251 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC103987.1-201ENST00000473394 348 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF34Q969K3 PARP4P3-201ENST00000510265 317 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF34Q969K3 PARP1P2-201ENST00000556806 195 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 CYCSP39-201ENST00000565821 309 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC005899.2-201ENST00000584353 90 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 IPO5P1-202ENST00000600039 287 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 AC007485.1-201ENST00000616755 206 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF34Q969K3 SCARNA4-202ENST00000625402 129 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF34Q969K3 SRP72P2-201ENST00000344851 1979 ntBASIC4.52□□□□□ -1.69
RNF34Q969K3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF34Q969K3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF34Q969K3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RNF34Q969K3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RNF34Q969K3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF34Q969K3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RNF34Q969K3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF34Q969K3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF34Q969K3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
RNF34Q969K3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF34Q969K3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF34Q969K3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF34Q969K3 RPL9P7-201ENST00000330965 580 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 RNU6-1309P-201ENST00000363305 108 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 Y_RNA.133-201ENST00000363428 110 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 RNU5E-7P-201ENST00000365290 117 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 RNU6-72P-201ENST00000384285 79 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF34Q969K3 AL513043.1-201ENST00000439124 535 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 MTND5P22-201ENST00000458380 195 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 RPL9P9-202ENST00000466501 579 ntBASIC4.51□□□□□ -1.69
RNF34Q969K3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF34Q969K3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF34Q969K3 ACA59.1-201ENST00000515966 143 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms