Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS3Q969F9 AL035413.2-201ENST00000604801 525 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 RNU6-89P-201ENST00000606519 100 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS3Q969F9 AC012314.7-201ENST00000619693 93 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS3Q969F9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC100810.6-201ENST00000638068 285 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HPS3Q969F9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS3Q969F9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HPS3Q969F9 AC022336.2-201ENST00000568966 2538 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS3Q969F9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS3Q969F9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS3Q969F9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS3Q969F9 RNA5SP119-201ENST00000362715 117 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 RNU6-82P-201ENST00000363970 107 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 RNU6-434P-201ENST00000384376 107 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 SNORA1.3-201ENST00000384676 136 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 SNORD70.1-201ENST00000391007 85 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 RPL21P111-201ENST00000418453 477 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 ZNF863P-201ENST00000426746 417 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS3Q969F9 RPL23AP69-201ENST00000431134 458 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 RPL21P41-201ENST00000459863 264 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS3Q969F9 SNORA20.3-201ENST00000516880 132 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 PSMA2P1-201ENST00000526365 646 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC022690.1-201ENST00000526681 550 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS3Q969F9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS3Q969F9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS3Q969F9 MIR1273C-201ENST00000578669 77 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 MIR548AC-201ENST00000585049 88 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 MIR8058-201ENST00000615737 89 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC002076.2-201ENST00000617362 122 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AL034408.1-202ENST00000636088 415 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 AC009093.8-201ENST00000641769 292 ntBASIC3.87□□□□□ -1.79
HPS3Q969F9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS3Q969F9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS3Q969F9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS3Q969F9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HPS3Q969F9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 SNORA72.1-201ENST00000363485 129 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RNU6-715P-201ENST00000365204 103 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RNU6-395P-201ENST00000365662 106 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RPS4XP3-201ENST00000398541 413 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RNU2-68P-201ENST00000410878 191 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.86□□□□□ -1.79
HPS3Q969F9 AL158071.1-201ENST00000430315 461 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RPS15AP27-201ENST00000449183 343 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 HMGB3P8-201ENST00000449709 577 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 CECR9-201ENST00000453421 199 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.86□□□□□ -1.79
HPS3Q969F9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.86□□□□□ -1.79
HPS3Q969F9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.86□□□□□ -1.79
HPS3Q969F9 RN7SL594P-201ENST00000470590 287 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AC012181.1-201ENST00000479895 423 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 RN7SKP18-201ENST00000516005 275 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AC026403.1-201ENST00000518938 295 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AC018638.8-201ENST00000588755 281 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AC136601.2-201ENST00000604356 474 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 Z82243.1-201ENST00000609432 473 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 U2.17-201ENST00000611454 95 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 AC093913.1-201ENST00000614178 329 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 MIR6076-201ENST00000617521 113 ntBASIC3.86□□□□□ -1.79
HPS3Q969F9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HPS3Q969F9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS3Q969F9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS3Q969F9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HPS3Q969F9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HPS3Q969F9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HPS3Q969F9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS3Q969F9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HPS3Q969F9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS3Q969F9 RNU6-140P-201ENST00000384566 108 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 MIR483-201ENST00000385070 76 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AL158156.1-201ENST00000422509 473 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 RPS3AP12-201ENST00000443616 753 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.85□□□□□ -1.79
HPS3Q969F9 AC007547.1-201ENST00000462177 490 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 HMGN2P26-201ENST00000463169 339 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AC106707.2-201ENST00000484182 374 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 Y_RNA.654-201ENST00000497848 106 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 SUMO2P6-201ENST00000505273 288 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 RNU2-27P-201ENST00000516185 142 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms