Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-1181P-201ENST00000384191 106 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RNU6-474P-201ENST00000384243 107 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 MTCYBP4-201ENST00000401524 249 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 PPIAP31-201ENST00000405422 495 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RNU6-628P-201ENST00000410675 107 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RNU2-37P-201ENST00000410695 177 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RPL37P10-201ENST00000412884 288 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 ATG3P1-201ENST00000419507 911 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AL160275.3-201ENST00000423876 471 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AC079780.1-201ENST00000428259 207 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RPL32P28-201ENST00000443577 397 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.21□□□□□ -1.74
ERCC4Q92889 RNU6-953P-201ENST00000459154 107 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ERCC4Q92889 RPL31P13-201ENST00000484151 370 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.21□□□□□ -1.74
ERCC4Q92889 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.21□□□□□ -1.74
ERCC4Q92889 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.21□□□□□ -1.74
ERCC4Q92889 ELOCP31-201ENST00000540463 467 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 OR8R1P-201ENST00000543943 764 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AC106782.4-201ENST00000568264 210 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 MIR4790-201ENST00000577799 79 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AL158032.1-201ENST00000605401 106 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 U2.17-201ENST00000611454 95 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RNVU1-4-201ENST00000612985 164 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.21□□□□□ -1.74
ERCC4Q92889 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 AC112200.1-201ENST00000625015 234 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC4Q92889 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
ERCC4Q92889 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ERCC4Q92889 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC4Q92889 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ERCC4Q92889 ZNF519P1-201ENST00000449011 1626 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC4Q92889 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 AC091152.2-201ENST00000591628 2569 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 RNU6-283P-201ENST00000364788 107 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 RNA5SP235-201ENST00000365411 114 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 TOMM22P1-201ENST00000418578 312 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC4Q92889 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC4Q92889 HSPE1P6-201ENST00000479457 291 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC079140.5-201ENST00000507882 310 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC104136.1-201ENST00000512969 394 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 RNU6-273P-201ENST00000516937 96 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.2□□□□□ -1.74
ERCC4Q92889 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC4Q92889 MIR3941-201ENST00000582572 103 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 MIR3171-201ENST00000584270 74 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 MIR5692C1-201ENST00000585309 91 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AL020997.2-201ENST00000602607 184 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 ATP1B3P1-201ENST00000605365 821 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AL080274.1-201ENST00000605565 220 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC022893.3-201ENST00000607665 437 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC084781.2-201ENST00000615568 161 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 AC022418.1-201ENST00000624118 445 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 ZNF826P-207ENST00000622273 1910 ntBASIC4.2□□□□□ -1.74
ERCC4Q92889 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ERCC4Q92889 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC4Q92889 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
ERCC4Q92889 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC4Q92889 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AC004925.1-201ENST00000624256 2706 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 RNU6-371P-201ENST00000364283 108 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 SNORA4.3-201ENST00000365564 137 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 Y_RNA.534-201ENST00000384599 112 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AL590704.1-201ENST00000402856 794 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RPL5P18-201ENST00000406671 891 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RNA5SP111-201ENST00000411386 101 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RPS12P24-201ENST00000412619 387 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AC080125.1-201ENST00000414888 684 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AL139396.1-201ENST00000421137 167 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AC002075.2-201ENST00000425207 252 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AL117339.2-201ENST00000430475 180 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RPL23AP69-201ENST00000431134 458 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC4Q92889 BRK1P2-201ENST00000442875 223 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 PRDX3P3-201ENST00000447765 522 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AC027575.1-201ENST00000481064 460 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AC009901.1-201ENST00000506703 541 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 AC008526.1-201ENST00000509149 338 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RPL39P5-202ENST00000512505 151 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RN7SKP24-201ENST00000515888 284 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RNU6-927P-201ENST00000516199 100 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RNU2-58P-201ENST00000516403 183 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RN7SKP209-201ENST00000516888 304 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 SNORA31.20-201ENST00000517111 133 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 RNU6-840P-201ENST00000517275 65 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms