Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MTND4P14-201ENST00000435799 1354 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 NACAP2-201ENST00000318548 624 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 RNA5SP197-201ENST00000363357 119 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MIR301A-201ENST00000385261 86 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AL606923.1-201ENST00000406616 190 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 ZNF863P-201ENST00000426746 417 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AL590664.1-201ENST00000448065 339 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC084357.1-201ENST00000473404 255 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 RPL38P4-201ENST00000502376 214 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC006445.2-201ENST00000510061 472 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 RNU6-1315P-201ENST00000517187 99 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AP003122.3-201ENST00000526316 255 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC084851.1-201ENST00000529105 249 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 HMGB1P14-201ENST00000557424 591 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AMZ2P1-203ENST00000565833 850 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MIR4325-201ENST00000583049 90 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 NRBF2P5-201ENST00000603087 788 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 HSPE1P7-201ENST00000604681 321 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC004805.2-201ENST00000605382 482 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AL020991.1-201ENST00000612314 373 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 AC135507.2-201ENST00000612443 309 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MIR6076-201ENST00000617521 113 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MIR3662-201ENST00000637030 95 ntBASIC3.43□□□□□ -1.86
HMGB4Q8WW32 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGB4Q8WW32 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 FTLP6-201ENST00000355274 422 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RNA5SP295-201ENST00000362655 121 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RNU4-20P-201ENST00000365601 151 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 SNORD37.1-201ENST00000390968 65 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 U3.26-201ENST00000391236 204 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AL139039.1-201ENST00000401900 692 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 SNRPEP9-201ENST00000436794 238 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 HMGB3P11-201ENST00000440127 604 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 Z75741.1-201ENST00000446793 314 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RPL31P58-201ENST00000469001 379 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RPL23AP11-201ENST00000475260 469 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 TRBV1-201ENST00000476502 284 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC110794.1-201ENST00000505816 425 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC009901.1-201ENST00000506703 541 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 RNA5SP165-201ENST00000517142 115 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 MIR1273C-201ENST00000578669 77 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 MIR5583-1-201ENST00000580941 59 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC010525.2-201ENST00000590920 195 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 AC068831.7-201ENST00000616954 363 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 uc_338.34-201ENST00000617467 174 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.42□□□□□ -1.86
HMGB4Q8WW32 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HMGB4Q8WW32 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 OR4G1P-203ENST00000641984 1631 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 TNPO1P3-201ENST00000436471 2662 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNU6-371P-201ENST00000364283 108 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNU6-38P-201ENST00000384085 107 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNU6-1035P-201ENST00000384477 107 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNU6-1127P-201ENST00000384580 107 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 MIR514A2-201ENST00000385131 88 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms