Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MTCO2P29-201ENST00000465212 189 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNU6-927P-201ENST00000516199 100 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC109329.2-201ENST00000519658 482 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 MIR3913-1-201ENST00000577744 102 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 MIR3611-201ENST00000584484 83 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC090578.1-201ENST00000604955 591 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AL451064.1-201ENST00000607718 471 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AL161734.1-201ENST00000609720 557 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC008498.1-201ENST00000613012 531 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 FRG1KP-201ENST00000623592 341 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AP003399.1-201ENST00000637534 361 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 FARSBP1-201ENST00000435808 1778 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNU6-188P-201ENST00000364207 107 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNY1P12-201ENST00000364251 105 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 SNORA75-201ENST00000384158 137 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNU6-39P-201ENST00000384344 107 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNU6-348P-201ENST00000384386 107 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 BTF3L4P1-201ENST00000413813 468 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 BX295541.1-201ENST00000417774 250 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC016907.1-201ENST00000419483 435 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RPL31P35-201ENST00000431058 377 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC009961.2-201ENST00000435771 251 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL031667.1-201ENST00000440222 725 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 NEFMP1-201ENST00000443423 1006 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 DDX3P2-201ENST00000446138 111 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL590639.1-201ENST00000456484 337 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RPL37P6-201ENST00000460682 294 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 KLF3P2-201ENST00000465138 268 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNU7-51P-201ENST00000516560 62 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 Vault.3-201ENST00000516676 95 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNU6-1220P-201ENST00000517126 108 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 HMGB1P41-201ENST00000520234 440 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC022616.3-201ENST00000523940 148 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AP006587.4-201ENST00000526053 529 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC027807.1-201ENST00000559921 996 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC012213.3-201ENST00000577199 777 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.6-201ENST00000603753 252 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.11-201ENST00000604059 253 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC008162.1-201ENST00000604718 254 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.1-201ENST00000604752 252 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC064872.1-201ENST00000604823 1072 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.5-201ENST00000605253 252 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.12-201ENST00000605291 253 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.8-201ENST00000605353 252 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL670379.7-201ENST00000605823 252 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC245008.1-201ENST00000608123 476 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 MTND1P37-201ENST00000636562 264 ntBASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC60Q8IWA6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 RNU5E-6P-201ENST00000365574 115 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 MIR27B-201ENST00000385129 97 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 RNA5SP210-201ENST00000391034 120 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 HMGB1P27-201ENST00000431429 603 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 BNIP3P2-201ENST00000441221 577 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AC013267.1-201ENST00000458227 267 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 RNU6-420P-201ENST00000458780 107 ntBASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC60Q8IWA6 RN7SKP24-201ENST00000515888 284 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms