Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 MAPK10-373ENST00000641983 6772 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 RNU6-99P-201ENST00000364721 107 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 Y_RNA.307-201ENST00000365022 117 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 Y_RNA.389-201ENST00000383924 113 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 RNU4-70P-201ENST00000384579 139 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 SNORA41-201ENST00000384675 132 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 SNORA57.1-201ENST00000391227 145 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 SNORA3.3-201ENST00000408712 125 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 MIR1183-201ENST00000408856 89 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AL359672.1-201ENST00000442302 409 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 RPS24P13-201ENST00000442520 397 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC008481.1-201ENST00000463278 396 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC022493.2-201ENST00000506122 481 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC104136.1-201ENST00000512969 394 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 RNU4-77P-201ENST00000516692 156 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 RNU6-388P-201ENST00000517012 105 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 RNU6-389P-201ENST00000517048 105 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 HSPE1P5-201ENST00000561489 272 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC005357.1-201ENST00000588399 301 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC092447.9-201ENST00000603395 144 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AL137849.1-201ENST00000604767 169 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 AL021879.1-201ENST00000611756 288 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC091812.1-201ENST00000432235 1948 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 HSPA8P4-201ENST00000511877 1920 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 Z73965.1-201ENST00000623412 2297 ntBASIC3.72□□□□□ -1.81
VRK3Q8IV63 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRK3Q8IV63 AC026951.1-201ENST00000559530 2459 ntBASIC3.71□□□□□ -1.81
VRK3Q8IV63 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRK3Q8IV63 RNU6-266P-201ENST00000364225 107 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 RNU6-1279P-201ENST00000383917 103 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 MIR548I3-201ENST00000408378 149 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 MIR548I1-201ENST00000408810 149 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL139247.1-201ENST00000422768 325 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 RPL7P2-201ENST00000427639 268 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 USP9YP30-201ENST00000430729 455 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 BX276092.4-201ENST00000452056 248 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC112492.4-201ENST00000456549 352 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC096745.1-201ENST00000509945 370 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC005798.1-201ENST00000513715 387 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 RNU6-408P-201ENST00000515910 100 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 RNU6-120P-201ENST00000516077 103 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 SCARNA16.2-201ENST00000516520 172 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AP006587.4-201ENST00000526053 529 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 CYCSP30-201ENST00000546447 172 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC026371.1-201ENST00000551867 419 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 MIR4644-201ENST00000579929 84 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC006254.3-201ENST00000603353 884 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL355297.3-201ENST00000604082 446 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 SNORD58B-201ENST00000607313 66 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL161423.1-201ENST00000613700 262 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AC099669.2-201ENST00000616549 437 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VRK3Q8IV63 MIR6130-201ENST00000619419 109 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL589994.2-201ENST00000621124 579 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 AL606534.2-204ENST00000635008 178 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 DDX10P1-201ENST00000448545 1933 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 CDC27P3-201ENST00000635418 1910 ntBASIC3.71□□□□□ -1.82
VRK3Q8IV63 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms