Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AL163153.1-201ENST00000554223 283 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.83□□□□□ -1.64
USP48Q86UV5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.83□□□□□ -1.64
USP48Q86UV5 U6.105-201ENST00000637379 88 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.83□□□□□ -1.64
USP48Q86UV5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
USP48Q86UV5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP48Q86UV5 MTCO1P12-201ENST00000414273 1543 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP48Q86UV5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.82□□□□□ -1.64
USP48Q86UV5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.82□□□□□ -1.64
USP48Q86UV5 Y_RNA.31-201ENST00000362574 102 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RNA5SP72-201ENST00000364442 117 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 MIR218-2-201ENST00000385006 110 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 MTCYBP4-201ENST00000401524 249 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 NDUFB4P4-201ENST00000404822 243 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RNU6-370P-201ENST00000411008 104 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RNU6-1304P-201ENST00000411374 106 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 Z92545.1-201ENST00000411782 234 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 RPS29P4-201ENST00000414733 161 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 Z85995.1-201ENST00000415547 335 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AL360271.2-201ENST00000447710 161 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 AC087884.1-201ENST00000469738 328 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RPL31P13-201ENST00000484151 370 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC090096.1-201ENST00000489168 390 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RPL31P61-201ENST00000496160 376 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.82□□□□□ -1.64
USP48Q86UV5 SUMO2P6-201ENST00000505273 288 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 SNORA70.16-201ENST00000516390 95 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RNU6-1046P-201ENST00000516538 107 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 RNU6-1315P-201ENST00000517187 99 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC087854.1-201ENST00000519706 414 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.82□□□□□ -1.64
USP48Q86UV5 AC004024.1-201ENST00000549244 247 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 MIR5684-201ENST00000585074 65 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 MIR3922-201ENST00000585192 84 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC073539.2-201ENST00000597113 165 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.82□□□□□ -1.64
USP48Q86UV5 AC106900.2-201ENST00000604994 317 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 AC010205.1-201ENST00000616668 449 ntBASIC4.82□□□□□ -1.64
USP48Q86UV5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
USP48Q86UV5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP48Q86UV5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
USP48Q86UV5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP48Q86UV5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP48Q86UV5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP48Q86UV5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP48Q86UV5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
USP48Q86UV5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
USP48Q86UV5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
USP48Q86UV5 Y_RNA.202-201ENST00000364083 110 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 RNU6-266P-201ENST00000364225 107 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 Y_RNA.422-201ENST00000384054 114 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 RNVU1-14-201ENST00000384770 164 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 MIR578-201ENST00000384828 96 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 MIR634-201ENST00000385208 97 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 MIR708-201ENST00000390708 88 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.81□□□□□ -1.64
USP48Q86UV5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AC130509.1-201ENST00000464158 433 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 RPL7P5-201ENST00000471472 736 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 AL160314.1-201ENST00000490836 438 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 RNU6-1332P-201ENST00000516666 104 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 AP004242.1-201ENST00000533701 349 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.81□□□□□ -1.64
USP48Q86UV5 DNAJC8P1-201ENST00000554535 372 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AC006270.2-201ENST00000578523 652 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 MIR5195-201ENST00000583555 115 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 AC136443.5-201ENST00000603741 370 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.81□□□□□ -1.64
USP48Q86UV5 AL355365.1-201ENST00000616480 294 ntBASIC4.81□□□□□ -1.64
USP48Q86UV5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USP48Q86UV5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP48Q86UV5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.81□□□□□ -1.64
USP48Q86UV5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USP48Q86UV5 MTND5P1-201ENST00000445440 1375 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.8□□□□□ -1.64
USP48Q86UV5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.8□□□□□ -1.64
USP48Q86UV5 Y_RNA.144-201ENST00000363521 113 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 Y_RNA.145-201ENST00000363527 102 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 Y_RNA.482-201ENST00000384377 111 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms