Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL355802.3-201ENST00000607571 545 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 AP003072.4-201ENST00000624580 310 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 RNU6-288P-201ENST00000363690 104 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 Y_RNA.412-201ENST00000384001 104 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 MIR767-201ENST00000390228 109 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 FTH1P15-201ENST00000406984 280 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 C1DP3-201ENST00000455013 423 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 RNU7-26P-201ENST00000458980 63 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 LDHBP3-201ENST00000514909 822 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 RN7SKP5-201ENST00000517045 272 ntBASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS13BQ7Z7G8 HNRNPDP2-201ENST00000406475 478 ntBASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AC133963.2-201ENST00000513686 578 ntBASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AP003497.1-201ENST00000528472 562 ntBASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AP001485.1-201ENST00000604799 199 ntBASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 AC004241.3-201ENST00000611728 517 ntBASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.35
VPS13BQ7Z7G8 SNORA68.1-201ENST00000364537 132 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 RNA5SP299-201ENST00000391203 116 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AC098614.2-201ENST00000426040 255 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AC121161.1-201ENST00000510606 652 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AL160236.1-201ENST00000556317 195 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 HSPE1P21-201ENST00000438283 308 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AC004854.1-201ENST00000440356 349 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 HSPE1P7-201ENST00000604681 321 ntBASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
VPS13BQ7Z7G8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC092393.1-201ENST00000439625 742 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC008751.2-201ENST00000597885 980 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 SDAD1P2-201ENST00000441308 2028 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 Y_RNA.390-201ENST00000383932 102 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AL138880.1-201ENST00000405824 642 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 RPL23AP3-201ENST00000453844 468 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 PABPC1P3-201ENST00000469174 459 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 SNORA48.10-201ENST00000516965 160 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 EIF4A1P12-201ENST00000551910 141 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC136932.1-201ENST00000574771 208 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 MIR4661-201ENST00000582720 75 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC087588.2-201ENST00000617667 426 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 ZNF702P-202ENST00000434269 1966 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 RNU6-629P-201ENST00000384061 103 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AL356320.2-201ENST00000417263 507 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 AP005639.2-201ENST00000527592 928 ntBASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13BQ7Z7G8 RNU6-666P-201ENST00000363499 107 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 RNY4P3-201ENST00000365254 95 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 RNU6-968P-201ENST00000384076 107 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 U3.29-201ENST00000391296 212 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 USP9YP35-201ENST00000435696 412 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 BX248409.1-201ENST00000455497 255 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AC104692.1-201ENST00000472406 90 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 OR2A41P-201ENST00000473586 105 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 MIR515-2-201ENST00000384883 83 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 MIR515-1-201ENST00000384884 83 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 MIR1912-201ENST00000410389 80 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 OR51AB1P-201ENST00000429046 620 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 SNRPGP6-201ENST00000451124 220 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 HSPE1P19-201ENST00000603327 295 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AL355810.1-201ENST00000614629 552 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 OR9R1P-201ENST00000412200 877 ntBASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS13BQ7Z7G8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms