Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC012158.1-204ENST00000483430 465 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC026801.1-201ENST00000497178 464 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC105758.1-201ENST00000506038 399 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC110768.1-201ENST00000509222 400 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC025465.3-201ENST00000510570 311 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-789P-201ENST00000517105 102 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC026371.1-201ENST00000551867 419 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 MTND4LP5-201ENST00000605152 292 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 HMGN2P28-201ENST00000606102 262 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AL672167.1-203ENST00000641299 2975 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-806P-201ENST00000365147 105 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-715P-201ENST00000365204 103 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 SNORD14.1-201ENST00000365609 90 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.562-201ENST00000384695 113 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR34B-201ENST00000385076 84 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR708-201ENST00000390708 88 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR1302-6-201ENST00000408466 90 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-516P-201ENST00000411381 104 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC011816.1-201ENST00000441346 546 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 FTH1P25-201ENST00000447665 469 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AL451050.1-201ENST00000450126 415 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 RPL9P32-201ENST00000464118 620 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC096745.1-201ENST00000509945 370 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-138P-201ENST00000515952 107 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 DEFB108D-201ENST00000527787 222 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 YPEL5P3-201ENST00000547227 352 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AL137100.2-201ENST00000555786 315 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 SUB1P3-201ENST00000564581 315 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AL138889.2-201ENST00000603883 242 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC096577.2-201ENST00000611455 153 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 AC103858.2-201ENST00000621471 543 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 MIR4272-201ENST00000635924 64 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 GABPAP-201ENST00000419271 1356 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 ZNF72P-201ENST00000425869 1908 ntBASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.34□□□□□ -1.71
CNKSR3Q6P9H4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNKSR3Q6P9H4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.34□□□□□ -1.72
CNKSR3Q6P9H4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CNKSR3Q6P9H4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CNKSR3Q6P9H4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 XIAPP3-201ENST00000312918 795 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 SNORA20.1-201ENST00000364790 130 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-432P-201ENST00000384196 109 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 Y_RNA.515-201ENST00000384535 112 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 MTND5P15-201ENST00000434246 349 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 MTND4LP30-201ENST00000454092 297 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 RNA5SP103-201ENST00000459503 118 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 HMGB1P25-201ENST00000468402 607 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 FO393415.2-201ENST00000480085 343 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 DEFB109F-201ENST00000491870 277 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 OR5D17P-201ENST00000531492 978 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 RRN3P3-201ENST00000549207 578 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AC005899.2-201ENST00000584353 90 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AC096772.1-201ENST00000609146 564 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 MIR7702-201ENST00000621931 59 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 AC005086.4-201ENST00000623065 213 ntBASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.33□□□□□ -1.72
CNKSR3Q6P9H4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms