Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 AC068790.3-201ENST00000602988 553 ntBASIC2.43□□□□□ -2.02
ATL3Q6DD88 AL391813.2-201ENST00000609113 322 ntBASIC2.43□□□□□ -2.02
ATL3Q6DD88 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.43□□□□□ -2.02
ATL3Q6DD88 CU459211.1-201ENST00000635667 749 ntBASIC2.43□□□□□ -2.02
ATL3Q6DD88 AP000553.5-201ENST00000641933 54 ntBASIC2.43□□□□□ -2.02
ATL3Q6DD88 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ATL3Q6DD88 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 MTND4P1-201ENST00000457501 1466 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 OR56A5-201ENST00000340110 738 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 Y_RNA.46-201ENST00000362695 102 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 RNU6-884P-201ENST00000363889 107 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 SNORA38-201ENST00000363946 132 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 Y_RNA.510-201ENST00000384511 114 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 HMGB3P2-201ENST00000411913 584 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 RPL23AP39-201ENST00000415533 405 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 ELOCP14-201ENST00000428070 331 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 ELOCP7-201ENST00000439968 331 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 GDI2P2-201ENST00000445131 608 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 RPL12P25-201ENST00000455592 494 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 MTCO1P42-201ENST00000457379 726 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AL049873.1-201ENST00000480540 376 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 NDUFB4P2-201ENST00000509515 391 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 RNU5F-8P-201ENST00000515941 111 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 SNORA31.3-201ENST00000516029 96 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC093012.1-202ENST00000549403 582 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 MRPS36P5-201ENST00000551909 298 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC026464.5-201ENST00000562497 722 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AP001004.1-201ENST00000582468 324 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AL136313.1-201ENST00000624804 202 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 MIR7515-201ENST00000637837 67 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATL3Q6DD88 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.42□□□□□ -2.02
ATL3Q6DD88 MTND5P29-201ENST00000458676 1807 ntBASIC2.42□□□□□ -2.02
ATL3Q6DD88 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 RNU6-500P-201ENST00000362349 107 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 Y_RNA.18-201ENST00000362461 102 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 RNY4P24-201ENST00000362735 96 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 RNU6-660P-201ENST00000364566 109 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 SNORA51.11-201ENST00000384442 131 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 BTF3P7-201ENST00000407097 488 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC023141.4-201ENST00000412031 328 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 SNRPEP9-201ENST00000436794 238 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC098831.1-201ENST00000440661 216 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 RPL23AP7-203ENST00000449021 469 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC079804.2-201ENST00000490376 200 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 RPF2P2-201ENST00000504693 896 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 MTND5P13-201ENST00000513046 1079 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC114781.4-201ENST00000513707 639 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC119751.5-201ENST00000514077 770 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 RNA5SP290-201ENST00000517133 127 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 ELOCP32-201ENST00000548625 324 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AC022022.2-201ENST00000602989 360 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.41□□□□□ -2.02
ATL3Q6DD88 U2.21-201ENST00000637295 81 ntBASIC2.41□□□□□ -2.02
ATL3Q6DD88 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATL3Q6DD88 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ATL3Q6DD88 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 Y_RNA.245-201ENST00000364493 95 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 RNU6-1083P-201ENST00000384022 107 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 SNORA6-201ENST00000384033 151 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 RNU6-14P-201ENST00000384630 106 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 RPS20P2-201ENST00000402520 389 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.4□□□□□ -2.03
ATL3Q6DD88 BPY2DP-201ENST00000422208 265 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC010153.1-201ENST00000432862 727 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 TIMM9P1-201ENST00000436122 256 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms