Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ATP1B3P1-201ENST00000605365 821 ntBASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 U2.17-201ENST00000611454 95 ntBASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 ZYXP1-201ENST00000617638 118 ntBASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 AC100810.6-201ENST00000638068 285 ntBASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.31□□□□□ -1.88
ATPAF1Q5TC12 Y_RNA.373-201ENST00000365600 103 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 Y_RNA.390-201ENST00000383932 102 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RPL5P18-201ENST00000406671 891 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RNA5SP118-201ENST00000410385 109 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RNU6-607P-201ENST00000411283 108 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 POLHP1-201ENST00000411806 470 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 BPY2DP-201ENST00000422208 265 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC005300.1-201ENST00000428401 373 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AL117339.2-201ENST00000430475 180 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RNU7-23P-201ENST00000459465 62 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 TRBV12-2-201ENST00000489763 344 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 HMGB1P30-201ENST00000492455 606 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC116353.2-201ENST00000505332 712 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 PRDX4P1-201ENST00000507189 574 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC114786.4-201ENST00000508771 728 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RNA5SP179-201ENST00000517284 121 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 OR8R1P-201ENST00000543943 764 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 LRRC37A5P-203ENST00000580181 585 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC060780.3-201ENST00000589464 80 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 VN1R80P-201ENST00000597126 338 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 AC091167.4-201ENST00000605079 184 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 RNVU1-4-201ENST00000612985 164 ntBASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.3□□□□□ -1.88
ATPAF1Q5TC12 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 CASC19-280ENST00000642102 1351 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 Y_RNA.167-201ENST00000363735 109 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 MIR10A-201ENST00000385043 110 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU4-26P-201ENST00000410270 107 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU4-6P-201ENST00000410804 122 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC023141.4-201ENST00000412031 328 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 PGBD4P6-201ENST00000421501 610 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RPS29P31-201ENST00000446147 164 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 NDUFB1P2-201ENST00000449477 176 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU6-1208P-201ENST00000459588 107 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC011005.2-201ENST00000487324 359 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC083904.1-201ENST00000487828 231 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 Y_RNA.654-201ENST00000497848 106 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC026784.1-201ENST00000507986 352 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNU6-189P-201ENST00000516120 101 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 Y_RNA.665-201ENST00000516177 98 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 SNORA31.21-201ENST00000517180 77 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC090115.3-201ENST00000553218 849 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AL606490.9-201ENST00000603331 271 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC002044.1-201ENST00000606707 158 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC006504.8-201ENST00000621046 635 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 AC090617.10-201ENST00000624308 134 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATPAF1Q5TC12 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.28□□□□□ -1.88
ATPAF1Q5TC12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATPAF1Q5TC12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATPAF1Q5TC12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATPAF1Q5TC12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATPAF1Q5TC12 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms