Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AL137003.2-201ENST00000606924 2538 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 FRG1CP-201ENST00000358464 769 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 SNORD113-7-201ENST00000363762 77 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNU6-335P-201ENST00000364563 113 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 MIR7-3-201ENST00000384898 110 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 MIR670-201ENST00000390142 98 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RPS4XP7-201ENST00000406274 780 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 MIR548F5-201ENST00000408421 86 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNU6-1304P-201ENST00000411374 106 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 BX682237.1-201ENST00000415016 335 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 MTCO1P39-201ENST00000426148 480 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC236972.2-201ENST00000434979 310 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNU7-66P-201ENST00000459469 62 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNU6-559P-201ENST00000516151 98 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RNU6-864P-201ENST00000516256 108 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 Vault.1-201ENST00000516474 102 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 SNORA70.18-201ENST00000516696 98 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AL022345.1-201ENST00000607292 135 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC009570.1-201ENST00000609599 745 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 U2.17-201ENST00000611454 95 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AC019176.2-201ENST00000611579 315 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 AP001148.1-201ENST00000624124 2359 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 PRO1804-201ENST00000623780 2050 ntBASIC4.12□□□□□ -1.75
CCDC178Q5BJE1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC103710.2-202ENST00000641454 2853 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 SNORA63-201ENST00000363450 132 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 Y_RNA.167-201ENST00000363735 109 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 Y_RNA.301-201ENST00000364990 103 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RNU6-715P-201ENST00000365204 103 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 Y_RNA.387-201ENST00000383918 102 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RNU6-14P-201ENST00000384630 106 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 MIR1302-11-201ENST00000408051 138 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 MIR1302-9-201ENST00000408365 138 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 MIR1302-10-201ENST00000408734 138 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 BX842559.1-201ENST00000419615 532 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RNU6-953P-201ENST00000459154 107 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 HIGD1AP13-201ENST00000509878 289 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RNU6-1088P-201ENST00000516850 104 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 RN7SKP258-201ENST00000517151 304 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC090136.1-201ENST00000520009 240 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 OR11H5P-201ENST00000554039 926 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 FRG2DP-202ENST00000566967 323 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC006557.5-201ENST00000603126 811 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AP001330.4-201ENST00000604350 154 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 MIR1302-2-201ENST00000607096 138 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC022893.3-201ENST00000607665 437 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 U4.6-201ENST00000621618 127 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 OR4G2P-202ENST00000641004 1759 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC068647.1-201ENST00000489539 2265 ntBASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC178Q5BJE1 AC073073.2-201ENST00000609827 2578 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 RNA5SP50-201ENST00000363731 107 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 U3.12-201ENST00000364498 214 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 Y_RNA.259-201ENST00000364619 101 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 Y_RNA.431-201ENST00000384086 102 ntBASIC4.1□□□□□ -1.75
CCDC178Q5BJE1 SNORA36C-201ENST00000384289 132 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms