| FOXC1 | Q12948 | RPL34P20-201 | ENST00000442771 | 351 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | HMGB3P8-201 | ENST00000449709 | 577 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC099560.2-201 | ENST00000457554 | 255 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RPL31P13-201 | ENST00000484151 | 370 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RPL21P129-201 | ENST00000491732 | 478 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC055733.2-201 | ENST00000504737 | 340 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | COX6B1P5-201 | ENST00000509843 | 249 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SNORA43.2-201 | ENST00000516652 | 128 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RPL23AP53-201 | ENST00000521854 | 457 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | PYM1-205 | ENST00000547925 | 499 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | CR936218.1-201 | ENST00000570454 | 304 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC119868.1-202 | ENST00000584741 | 347 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | LINC01900-203 | ENST00000585185 | 393 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC011473.2-201 | ENST00000596286 | 240 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC062037.1-201 | ENST00000605302 | 128 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC116447.1-201 | ENST00000613153 | 453 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC099669.2-201 | ENST00000616549 | 437 nt | BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | LINC01232-203 | ENST00000625369 | 576 nt | TSL 4 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | COA1-220 | ENST00000640232 | 192 nt | APPRIS ALT2 TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | PRICKLE1-202 | ENST00000445766 | 4075 nt | APPRIS P1 TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ERVW-1-201 | ENST00000493463 | 2925 nt | APPRIS P1 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | NUMB-204 | ENST00000535282 | 3198 nt | APPRIS ALT1 TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SLC15A2-201 | ENST00000295605 | 2379 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | TRPC1-205 | ENST00000612385 | 3620 nt | APPRIS P3 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ITCH-207 | ENST00000535650 | 2940 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | CAV1-205 | ENST00000405348 | 2443 nt | APPRIS ALT1 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | CPNE8-202 | ENST00000360449 | 1757 nt | APPRIS ALT2 TSL 2 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MYBPC1-216 | ENST00000550270 | 3426 nt | APPRIS ALT2 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SLC26A7-209 | ENST00000617078 | 5094 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | POC1B-201 | ENST00000313546 | 3001 nt | APPRIS P1 TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC018555.1-201 | ENST00000567548 | 1980 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | U3.9-201 | ENST00000363823 | 204 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SNORD58C-201 | ENST00000365223 | 64 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AL359837.1-201 | ENST00000381357 | 287 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | TRAV24-201 | ENST00000390453 | 343 nt | APPRIS P1 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SNORA57.1-201 | ENST00000391227 | 145 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNU6-603P-201 | ENST00000411403 | 107 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC007568.1-201 | ENST00000422912 | 471 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ATP6V0E1P2-201 | ENST00000441771 | 245 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | FLJ27354-202 | ENST00000443562 | 770 nt | TSL 3 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | EIF4A1P11-201 | ENST00000451239 | 222 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC012668.1-201 | ENST00000457625 | 228 nt | TSL 3 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | Y_RNA.692-201 | ENST00000516627 | 105 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNA5SP54-201 | ENST00000516951 | 92 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AP003400.1-201 | ENST00000528319 | 231 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SLC14A2-AS1-204 | ENST00000592899 | 359 nt | TSL 3 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC005255.1-201 | ENST00000593748 | 216 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | LMO3-225 | ENST00000541295 | 3498 nt | TSL 2 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | C6orf10-209 | ENST00000612031 | 2179 nt | APPRIS ALT2 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MDGA2-201 | ENST00000357362 | 2965 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | DAZ2-202 | ENST00000382306 | 3781 nt | APPRIS ALT2 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | NBPF9-208 | ENST00000621074 | 4302 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RXFP1-206 | ENST00000460056 | 2735 nt | TSL 2 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | CLVS1-205 | ENST00000519846 | 3622 nt | APPRIS P1 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ARAP2-210 | ENST00000618163 | 2592 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | PRLR-201 | ENST00000231423 | 1679 nt | TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MAK-203 | ENST00000474039 | 3859 nt | APPRIS P1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MYBPC1-203 | ENST00000392934 | 3644 nt | APPRIS ALT2 TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ORC4-216 | ENST00000540442 | 6472 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | TTC21B-201 | ENST00000243344 | 5482 nt | APPRIS P1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | GLCE-201 | ENST00000261858 | 5037 nt | APPRIS P1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MUC4-215 | ENST00000475231 | 16273 nt | APPRIS ALT2 TSL 5 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | ZNF292-201 | ENST00000339907 | 8287 nt | APPRIS ALT1 TSL 5 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AFF2-201 | ENST00000286437 | 12280 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC007557.3-201 | ENST00000418591 | 3135 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | GPHN-204 | ENST00000543237 | 2459 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MUM1L1-202 | ENST00000357175 | 4173 nt | APPRIS P1 TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | LINC00283-201 | ENST00000430111 | 1947 nt | TSL 5 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | FRMD7-202 | ENST00000370879 | 2864 nt | TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | U3.3-201 | ENST00000362986 | 216 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNU6-1131P-201 | ENST00000364955 | 107 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SNORA66-201 | ENST00000384792 | 133 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | SNORD72-201 | ENST00000390994 | 80 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MIR1250-201 | ENST00000408098 | 113 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNA5SP113-201 | ENST00000410486 | 84 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | Y_RNA.617-201 | ENST00000410920 | 90 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | Z85995.1-201 | ENST00000415547 | 335 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC096649.2-201 | ENST00000416186 | 393 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC025741.1-201 | ENST00000506100 | 544 nt | TSL 4 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | RNU6-1061P-201 | ENST00000516530 | 99 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | FTH1P11-201 | ENST00000517577 | 551 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | IGKV1-32-201 | ENST00000519290 | 311 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | TRPT1-216 | ENST00000546133 | 382 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | PCED1B-AS1-208 | ENST00000551898 | 359 nt | TSL 3 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MIR3160-1-201 | ENST00000577972 | 85 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC005224.3-201 | ENST00000584683 | 2140 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MIR4496-201 | ENST00000635896 | 61 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MIR3674-201 | ENST00000636576 | 68 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AL596275.2-206 | ENST00000641957 | 626 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | EIF2AK3-203 | ENST00000419748 | 4222 nt | TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MELK-210 | ENST00000543751 | 2400 nt | TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | PTBP3-207 | ENST00000458258 | 7995 nt | TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | MTRR-202 | ENST00000440940 | 3215 nt | APPRIS P1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | FAM13A-AS1-201 | ENST00000500765 | 3210 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| FOXC1 | Q12948 | AC011912.1-201 | ENST00000623483 | 5819 nt | TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |