Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC092047.1-201ENST00000424997 240 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL445646.1-201ENST00000431784 216 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 MTCO3P45-201ENST00000443036 613 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC009296.1-201ENST00000443146 155 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL591719.1-201ENST00000444669 744 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 DDX3P2-201ENST00000446138 111 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL118520.1-201ENST00000450770 291 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 MTND2P24-201ENST00000453434 806 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 RNU6-420P-201ENST00000458780 107 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 RPS20P20-201ENST00000460498 340 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC008481.1-201ENST00000463278 396 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC010631.1-201ENST00000474150 156 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 GLYCAM1-201ENST00000546596 285 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 TRAV28-201ENST00000557548 323 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC090888.2-201ENST00000559765 1144 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC009094.1-201ENST00000564443 426 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 AL121917.1-203ENST00000605534 577 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC091965.4-201ENST00000607691 587 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 AC013476.2-201ENST00000614456 459 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 MTND1P37-201ENST00000636562 264 ntBASIC2.24□□□□□ -2.05
SMARCB1Q12824 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SMARCB1Q12824 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SMARCB1Q12824 SNORA68.1-201ENST00000364537 132 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 RNU6-1035P-201ENST00000384477 107 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 TXNP7-201ENST00000406296 293 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 HMGB1P11-201ENST00000413899 637 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 VPS26BP1-201ENST00000417155 755 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC007919.1-201ENST00000429380 217 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL356867.1-201ENST00000429623 299 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC010153.1-201ENST00000432862 727 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL008629.1-201ENST00000438615 184 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 Z82210.1-201ENST00000440037 231 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC005094.1-201ENST00000440420 368 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL049734.2-201ENST00000441066 616 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 PIGFP3-201ENST00000441918 722 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMARCB1Q12824 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 RN7SKP287-201ENST00000516546 266 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 SNORA31.18-201ENST00000517043 134 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AP003461.1-201ENST00000528866 78 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SMARCB1Q12824 ELOCP32-201ENST00000548625 324 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SMARCB1Q12824 LRRC37A5P-203ENST00000580181 585 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AF038458.1-201ENST00000588406 262 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 DPPA3P3-201ENST00000603842 430 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC093424.1-201ENST00000604999 338 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC007038.2-201ENST00000608095 740 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 SDR42E1P2-201ENST00000614861 481 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL136313.1-201ENST00000624804 202 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 AC008993.2-201ENST00000631744 806 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMARCB1Q12824 AL137003.2-201ENST00000606924 2538 ntBASIC2.23□□□□□ -2.05
SMARCB1Q12824 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMARCB1Q12824 AC022336.2-201ENST00000568966 2538 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMARCB1Q12824 AL109809.4-201ENST00000603520 2185 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 RNU6-217P-201ENST00000384164 104 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 U8.14-201ENST00000390843 143 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 U3.40-201ENST00000408706 208 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 RNU2-33P-201ENST00000410344 192 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 BX276092.3-201ENST00000424182 230 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 AL358075.3-201ENST00000426289 226 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 AP1S2P1-201ENST00000457344 379 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 MTCO1P42-201ENST00000457379 726 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 RNU7-23P-201ENST00000459465 62 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
SMARCB1Q12824 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.22□□□□□ -2.05
SMARCB1Q12824 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms