Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPS20P20-201ENST00000460498 340 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC008379.1-201ENST00000463655 464 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC099513.1-201ENST00000490423 301 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC124293.1-201ENST00000530034 493 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 RRN3P3-201ENST00000549207 578 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC103987.3-201ENST00000582071 292 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AP001485.1-201ENST00000604799 199 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC006338.1-201ENST00000618453 749 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AC090617.9-201ENST00000623751 147 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 AL118508.4-201ENST00000624142 1176 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 ZNF680P1-201ENST00000436625 1469 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 RNU4-13P-201ENST00000364019 141 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 RNU6-619P-201ENST00000365146 108 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 RNU2-41P-201ENST00000410991 178 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 C1DP1-201ENST00000426049 402 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 USP9YP24-201ENST00000434374 697 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 ARPC3P5-201ENST00000448802 534 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 KATNBL1P6-201ENST00000453433 915 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC018868.1-201ENST00000491307 315 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC084024.2-201ENST00000503480 791 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC023813.2-201ENST00000564321 469 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AP001429.1-201ENST00000602568 530 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC022387.2-201ENST00000604050 448 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.02□□□□□ -2.25
HIST1H1AQ02539 AC021755.4-201ENST00000616620 456 ntBASIC1.02□□□□□ -2.25
HIST1H1AQ02539 Z75746.1-201ENST00000440243 2080 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 SGO1P1-201ENST00000603525 1447 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 TMSB4XP8-201ENST00000402089 135 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 RPL26P27-201ENST00000414397 437 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 TMSB4XP6-201ENST00000415187 135 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 TMSB4XP1-201ENST00000424567 135 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 RPL7P34-201ENST00000433316 712 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AL121890.1-201ENST00000435457 205 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 PTENP1-201ENST00000447117 1215 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AL353691.1-201ENST00000451332 387 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AP001324.2-201ENST00000461163 319 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC135279.1-201ENST00000543493 504 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC005261.5-201ENST00000596280 355 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 BNIP3P23-201ENST00000599655 511 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC092953.2-201ENST00000608000 699 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC239868.4-201ENST00000608318 671 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AP005229.2-201ENST00000609980 697 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 DUSP12P1-201ENST00000612874 516 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 U2.21-201ENST00000637295 81 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 AC241585.2-209ENST00000638217 143 ntBASIC1.01□□□□□ -2.25
HIST1H1AQ02539 ZNF209P-201ENST00000593450 2304 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1□□□□□ -2.25
HIST1H1AQ02539 ZNF72P-201ENST00000425869 1908 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 RNU6-661P-201ENST00000362409 107 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 MIR16-1-201ENST00000385271 89 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 RNU1-78P-201ENST00000391248 165 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 AC097463.2-201ENST00000421074 142 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 HMGB1P27-201ENST00000431429 603 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 MTCO1P57-201ENST00000432182 261 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 AL161651.1-201ENST00000440882 223 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1□□□□□ -2.25
HIST1H1AQ02539 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1□□□□□ -2.25
HIST1H1AQ02539 AL590365.1-201ENST00000450788 243 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 FCF1P6-201ENST00000456841 595 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1□□□□□ -2.25
HIST1H1AQ02539 RPS15AP36-201ENST00000492022 382 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 BOLA3P3-201ENST00000505182 232 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1□□□□□ -2.25
HIST1H1AQ02539 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1□□□□□ -2.25
HIST1H1AQ02539 AC005832.3-201ENST00000537929 631 ntBASIC1□□□□□ -2.25
HIST1H1AQ02539 DNAJC19P9-201ENST00000555084 351 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms