Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL442663.2-201ENST00000554385 511 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.69□□□□□ -1.98
LMO4P61968 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.69□□□□□ -1.98
LMO4P61968 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
LMO4P61968 MIR2682-201ENST00000580305 110 ntBASIC2.69□□□□□ -1.98
LMO4P61968 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 AC245517.5-201ENST00000611529 162 ntBASIC2.69□□□□□ -1.98
LMO4P61968 RNVU1-4-201ENST00000612985 164 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC002550.2-201ENST00000621246 394 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC018692.3-201ENST00000623929 123 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
LMO4P61968 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 AC091152.2-201ENST00000591628 2569 ntBASIC2.69□□□□□ -1.98
LMO4P61968 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 AL138713.1-201ENST00000624026 2130 ntBASIC2.69□□□□□ -1.98
LMO4P61968 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LMO4P61968 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 ASNSP3-201ENST00000451989 1306 ntBASIC2.68□□□□□ -1.98
LMO4P61968 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 AC009812.4-201ENST00000569134 1805 ntBASIC2.68□□□□□ -1.98
LMO4P61968 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.326-201ENST00000365176 113 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MIR514A2-201ENST00000385131 88 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MIR514A3-201ENST00000385132 88 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MIR591-201ENST00000385290 95 ntBASIC2.68□□□□□ -1.98
LMO4P61968 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LMO4P61968 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.615-201ENST00000410769 117 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MTND3P8-201ENST00000412909 339 ntBASIC2.68□□□□□ -1.98
LMO4P61968 NDUFB4P5-201ENST00000415445 361 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 AC009161.1-201ENST00000417306 376 ntBASIC2.68□□□□□ -1.98
LMO4P61968 USP9YP20-201ENST00000419224 558 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 RPL27AP8-201ENST00000424277 446 ntBASIC2.68□□□□□ -1.98
LMO4P61968 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 RPL23AP82-202ENST00000427528 469 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AC005534.2-201ENST00000431047 433 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MTCYBP6-201ENST00000441810 138 ntBASIC2.68□□□□□ -1.98
LMO4P61968 CENPBD1P1-201ENST00000464061 469 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MRPS17P3-201ENST00000465453 385 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AL049714.1-201ENST00000466686 347 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AC012181.1-201ENST00000479895 423 ntBASIC2.68□□□□□ -1.98
LMO4P61968 RPL7P47-201ENST00000497299 556 ntBASIC2.68□□□□□ -1.98
LMO4P61968 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 RNU4-49P-201ENST00000516080 140 ntBASIC2.68□□□□□ -1.98
LMO4P61968 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.68□□□□□ -1.98
LMO4P61968 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 AC106782.4-201ENST00000568264 210 ntBASIC2.68□□□□□ -1.98
LMO4P61968 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 AL133255.1-201ENST00000606374 441 ntBASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.812-201ENST00000610788 101 ntBASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.784-201ENST00000613803 101 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AL162274.2-201ENST00000614406 332 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.787-201ENST00000616522 101 ntBASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.780-201ENST00000617336 101 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AC002076.2-201ENST00000617362 122 ntBASIC2.68□□□□□ -1.98
LMO4P61968 Y_RNA.801-201ENST00000619005 101 ntBASIC2.68□□□□□ -1.98
LMO4P61968 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.68□□□□□ -1.98
LMO4P61968 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.68□□□□□ -1.98
LMO4P61968 MTND4P35-201ENST00000604257 1375 ntBASIC2.68□□□□□ -1.98
LMO4P61968 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
LMO4P61968 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
LMO4P61968 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMO4P61968 AC004972.1-201ENST00000623934 2209 ntBASIC2.68□□□□□ -1.98
LMO4P61968 ZNF807-201ENST00000328088 1707 ntBASIC2.68□□□□□ -1.98
LMO4P61968 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LMO4P61968 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.67□□□□□ -1.98
LMO4P61968 DEFB108F-201ENST00000344638 222 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MIR422A-201ENST00000362286 90 ntBASIC2.67□□□□□ -1.98
LMO4P61968 Y_RNA.138-201ENST00000363462 102 ntBASIC2.67□□□□□ -1.98
LMO4P61968 Y_RNA.162-201ENST00000363683 102 ntBASIC2.67□□□□□ -1.98
LMO4P61968 Y_RNA.231-201ENST00000364358 102 ntBASIC2.67□□□□□ -1.98
LMO4P61968 Y_RNA.474-201ENST00000384341 102 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MIR558-201ENST00000384920 94 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MIR454-201ENST00000390180 115 ntBASIC2.67□□□□□ -1.98
LMO4P61968 SNORD37.1-201ENST00000390968 65 ntBASIC2.67□□□□□ -1.98
LMO4P61968 RNU6-510P-201ENST00000391239 108 ntBASIC2.67□□□□□ -1.98
LMO4P61968 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.67□□□□□ -1.98
LMO4P61968 UBA52P6-201ENST00000399822 382 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AL590004.1-201ENST00000405321 300 ntBASIC2.67□□□□□ -1.98
LMO4P61968 TXNP7-201ENST00000406296 293 ntBASIC2.67□□□□□ -1.98
LMO4P61968 RNA5SP229-201ENST00000410809 99 ntBASIC2.67□□□□□ -1.98
LMO4P61968 RNU6-193P-201ENST00000410977 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms