Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RPL23AP35-201ENST00000451906 501 ntBASIC2.05□□□□□ -2.08
VSX2P58304 OR6C5P-201ENST00000452388 923 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.05□□□□□ -2.08
VSX2P58304 DUXAP8-207ENST00000456786 622 ntBASIC2.05□□□□□ -2.08
VSX2P58304 RPF2P2-201ENST00000504693 896 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AC092436.1-201ENST00000506450 503 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AC110760.3-202ENST00000515177 371 ntBASIC2.05□□□□□ -2.08
VSX2P58304 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.05□□□□□ -2.08
VSX2P58304 AP004247.1-201ENST00000531556 1289 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AC093012.1-202ENST00000549403 582 ntBASIC2.05□□□□□ -2.08
VSX2P58304 MTND4P33-201ENST00000556706 766 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.05□□□□□ -2.08
VSX2P58304 AC007349.4-201ENST00000608114 532 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.05□□□□□ -2.08
VSX2P58304 AC010378.1-201ENST00000619270 362 ntBASIC2.05□□□□□ -2.08
VSX2P58304 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.05□□□□□ -2.08
VSX2P58304 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.05□□□□□ -2.08
VSX2P58304 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VSX2P58304 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VSX2P58304 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
VSX2P58304 AL137003.2-201ENST00000606924 2538 ntBASIC2.05□□□□□ -2.08
VSX2P58304 RN7SKP226-201ENST00000364912 300 ntBASIC2.04□□□□□ -2.08
VSX2P58304 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL355497.1-201ENST00000406262 551 ntBASIC2.04□□□□□ -2.08
VSX2P58304 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.04□□□□□ -2.08
VSX2P58304 AC104454.1-201ENST00000421341 1401 ntBASIC2.04□□□□□ -2.08
VSX2P58304 BX276092.3-201ENST00000424182 230 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 MTCO3P30-201ENST00000426425 670 ntBASIC2.04□□□□□ -2.08
VSX2P58304 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.04□□□□□ -2.08
VSX2P58304 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.04□□□□□ -2.08
VSX2P58304 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.04□□□□□ -2.08
VSX2P58304 FDX1P2-201ENST00000450769 375 ntBASIC2.04□□□□□ -2.08
VSX2P58304 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.04□□□□□ -2.08
VSX2P58304 RNU7-59P-201ENST00000459101 61 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 NDUFB4P2-201ENST00000509515 391 ntBASIC2.04□□□□□ -2.08
VSX2P58304 RN7SKP258-201ENST00000517151 304 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AC105185.1-201ENST00000518705 535 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.04□□□□□ -2.08
VSX2P58304 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.04□□□□□ -2.08
VSX2P58304 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL391001.1-201ENST00000602747 715 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL450336.1-201ENST00000605180 586 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AC004908.2-201ENST00000609090 574 ntBASIC2.04□□□□□ -2.08
VSX2P58304 OR10AB1P-201ENST00000609613 938 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 AL589743.7-201ENST00000612637 233 ntBASIC2.04□□□□□ -2.08
VSX2P58304 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.04□□□□□ -2.08
VSX2P58304 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 OR4G3P-201ENST00000633500 913 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AC093591.3-201ENST00000634516 308 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
VSX2P58304 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
VSX2P58304 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.04□□□□□ -2.08
VSX2P58304 AC010889.1-201ENST00000566193 2666 ntBASIC2.04□□□□□ -2.08
VSX2P58304 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 AC080128.1-201ENST00000474389 1917 ntBASIC2.03□□□□□ -2.08
VSX2P58304 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
VSX2P58304 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 UBE2L2-201ENST00000254302 429 ntBASIC2.03□□□□□ -2.08
VSX2P58304 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
VSX2P58304 RNU4-26P-201ENST00000410270 107 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AL008987.1-201ENST00000415528 237 ntBASIC2.03□□□□□ -2.08
VSX2P58304 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.03□□□□□ -2.08
VSX2P58304 MED14P1-201ENST00000430517 648 ntBASIC2.03□□□□□ -2.08
VSX2P58304 Z98742.2-201ENST00000431564 187 ntBASIC2.03□□□□□ -2.08
VSX2P58304 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 CR769776.1-201ENST00000441254 787 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AC106872.3-201ENST00000495104 446 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.03□□□□□ -2.08
VSX2P58304 AP000907.2-201ENST00000530827 353 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.03□□□□□ -2.08
VSX2P58304 AC104763.2-201ENST00000604179 382 ntBASIC2.03□□□□□ -2.08
VSX2P58304 MIR7843-201ENST00000622274 79 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
VSX2P58304 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
VSX2P58304 AC103706.2-201ENST00000638080 240 ntBASIC2.03□□□□□ -2.08
VSX2P58304 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VSX2P58304 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VSX2P58304 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.03□□□□□ -2.08
VSX2P58304 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.03□□□□□ -2.09
VSX2P58304 RNU6-931P-201ENST00000363850 107 ntBASIC2.02□□□□□ -2.09
VSX2P58304 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VSX2P58304 HMGB3P2-201ENST00000411913 584 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.02□□□□□ -2.09
VSX2P58304 HMGB1P11-201ENST00000413899 637 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms