Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC008264.1-201ENST00000447612 367 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC091153.1-201ENST00000466297 402 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RN7SL601P-201ENST00000471221 293 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AL135752.1-201ENST00000479477 471 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC092989.1-201ENST00000481235 277 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.01□□□□□ -1.93
CLDN20P56880 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RNU6-914P-201ENST00000516749 109 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN20P56880 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AC092325.1-201ENST00000566449 554 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN20P56880 BNIP3P30-201ENST00000601184 574 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC104458.1-201ENST00000608243 463 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AC002076.2-201ENST00000617362 122 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN20P56880 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN20P56880 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN20P56880 FAM35BP-202ENST00000497389 3337 ntBASIC3.01□□□□□ -1.93
CLDN20P56880 MTND5P1-201ENST00000445440 1375 ntBASIC3□□□□□ -1.93
CLDN20P56880 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN20P56880 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN20P56880 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3□□□□□ -1.93
CLDN20P56880 RNU6-552P-201ENST00000362869 119 ntBASIC3□□□□□ -1.93
CLDN20P56880 Y_RNA.89-201ENST00000363031 102 ntBASIC3□□□□□ -1.93
CLDN20P56880 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3□□□□□ -1.93
CLDN20P56880 RNU6-903P-201ENST00000391270 109 ntBASIC3□□□□□ -1.93
CLDN20P56880 RPS4XP3-201ENST00000398541 413 ntBASIC3□□□□□ -1.93
CLDN20P56880 RNU4-46P-201ENST00000410818 138 ntBASIC3□□□□□ -1.93
CLDN20P56880 OFD1P1Y-201ENST00000411756 1225 ntBASIC3□□□□□ -1.93
CLDN20P56880 OR6C66P-201ENST00000414917 930 ntBASIC3□□□□□ -1.93
CLDN20P56880 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3□□□□□ -1.93
CLDN20P56880 AL592045.1-201ENST00000429867 352 ntBASIC3□□□□□ -1.93
CLDN20P56880 MRPS10P2-201ENST00000431226 381 ntBASIC3□□□□□ -1.93
CLDN20P56880 GPM6BP2-201ENST00000432046 144 ntBASIC3□□□□□ -1.93
CLDN20P56880 GPM6BP1-201ENST00000446387 144 ntBASIC3□□□□□ -1.93
CLDN20P56880 AL118520.1-201ENST00000450770 291 ntBASIC3□□□□□ -1.93
CLDN20P56880 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
CLDN20P56880 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3□□□□□ -1.93
CLDN20P56880 FABP5P15-201ENST00000453566 214 ntBASIC3□□□□□ -1.93
CLDN20P56880 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
CLDN20P56880 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3□□□□□ -1.93
CLDN20P56880 RNU6-143P-201ENST00000516942 93 ntBASIC3□□□□□ -1.93
CLDN20P56880 SCARNA20.6-201ENST00000517251 106 ntBASIC3□□□□□ -1.93
CLDN20P56880 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3□□□□□ -1.93
CLDN20P56880 MTND1P35-201ENST00000526739 508 ntBASIC3□□□□□ -1.93
CLDN20P56880 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3□□□□□ -1.93
CLDN20P56880 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3□□□□□ -1.93
CLDN20P56880 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3□□□□□ -1.93
CLDN20P56880 AL138889.2-201ENST00000603883 242 ntBASIC3□□□□□ -1.93
CLDN20P56880 MIR15A-201ENST00000607334 83 ntBASIC3□□□□□ -1.93
CLDN20P56880 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3□□□□□ -1.93
CLDN20P56880 AC096577.2-201ENST00000611455 153 ntBASIC3□□□□□ -1.93
CLDN20P56880 MIR6076-201ENST00000617521 113 ntBASIC3□□□□□ -1.93
CLDN20P56880 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3□□□□□ -1.93
CLDN20P56880 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3□□□□□ -1.93
CLDN20P56880 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CLDN20P56880 Z83843.1-201ENST00000604070 3685 ntBASIC3□□□□□ -1.93
CLDN20P56880 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN20P56880 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
CLDN20P56880 AC022336.2-201ENST00000568966 2538 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CLDN20P56880 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN20P56880 U3.6-201ENST00000363622 211 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 RNU6-534P-201ENST00000364877 106 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 CISD1P1-201ENST00000393907 327 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 UBE2V1P2-201ENST00000397758 440 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 RNA5SP120-201ENST00000410900 112 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN20P56880 GTF2IP20-201ENST00000431663 360 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AL139415.2-201ENST00000431968 163 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AL591704.1-201ENST00000432574 275 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 HMGB3P11-201ENST00000440127 604 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 BX510359.1-201ENST00000456973 237 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 MTCO3P38-201ENST00000468910 766 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AC109927.2-201ENST00000506416 303 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 RNA5SP401-201ENST00000515920 127 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 RNU6-1178P-201ENST00000516674 107 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 HMGB1P14-201ENST00000557424 591 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms