Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH6P55285 AC022662.1-201ENST00000580252 331 ntBASIC2.16□□□□□ -2.06
CDH6P55285 AC105245.1-201ENST00000581934 244 ntBASIC2.16□□□□□ -2.06
CDH6P55285 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH6P55285 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.16□□□□□ -2.06
CDH6P55285 AC025048.6-202ENST00000627667 438 ntBASIC2.16□□□□□ -2.06
CDH6P55285 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH6P55285 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CDH6P55285 AL359854.1-201ENST00000614203 1594 ntBASIC2.15□□□□□ -2.06
CDH6P55285 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
CDH6P55285 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH6P55285 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH6P55285 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH6P55285 RNU6-1284P-201ENST00000363701 100 ntBASIC2.15□□□□□ -2.07
CDH6P55285 RNU4-92P-201ENST00000363783 136 ntBASIC2.15□□□□□ -2.07
CDH6P55285 RNA5SP125-201ENST00000364843 120 ntBASIC2.15□□□□□ -2.07
CDH6P55285 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
CDH6P55285 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH6P55285 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH6P55285 RNU6-636P-201ENST00000384598 107 ntBASIC2.15□□□□□ -2.07
CDH6P55285 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDH6P55285 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
CDH6P55285 ZNF90P2-204ENST00000419323 1075 ntBASIC2.15□□□□□ -2.07
CDH6P55285 DPH3P2-201ENST00000422618 250 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH6P55285 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH6P55285 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDH6P55285 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.15□□□□□ -2.07
CDH6P55285 AC096638.1-201ENST00000444678 216 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH6P55285 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH6P55285 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.15□□□□□ -2.07
CDH6P55285 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
CDH6P55285 RPF2P2-201ENST00000504693 896 ntBASIC2.15□□□□□ -2.07
CDH6P55285 SNORA31.3-201ENST00000516029 96 ntBASIC2.15□□□□□ -2.07
CDH6P55285 RNU6-64P-201ENST00000517119 105 ntBASIC2.15□□□□□ -2.07
CDH6P55285 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH6P55285 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH6P55285 AC068790.3-201ENST00000602988 553 ntBASIC2.15□□□□□ -2.07
CDH6P55285 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDH6P55285 AL592221.1-201ENST00000605266 382 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC012150.2-201ENST00000621300 544 ntBASIC2.15□□□□□ -2.07
CDH6P55285 PISRT1-201ENST00000626175 531 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC092125.1-201ENST00000562568 1995 ntBASIC2.15□□□□□ -2.07
CDH6P55285 AC004944.1-201ENST00000517807 3059 ntBASIC2.15□□□□□ -2.07
CDH6P55285 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH6P55285 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
CDH6P55285 NACAP2-201ENST00000318548 624 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU6-486P-201ENST00000363116 107 ntBASIC2.14□□□□□ -2.07
CDH6P55285 SNORA4.1-201ENST00000364263 144 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU6-512P-201ENST00000364438 103 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU6-19P-201ENST00000384718 107 ntBASIC2.14□□□□□ -2.07
CDH6P55285 MIR147B-201ENST00000390185 80 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU6-278P-201ENST00000390945 109 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RN7SKP32-201ENST00000410167 303 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH6P55285 AC003685.2-201ENST00000422795 395 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RPS3AP44-201ENST00000425466 790 ntBASIC2.14□□□□□ -2.07
CDH6P55285 PTGES3P4-201ENST00000426243 356 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AL139415.2-201ENST00000431968 163 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH6P55285 MTND3P1-201ENST00000441336 220 ntBASIC2.14□□□□□ -2.07
CDH6P55285 USP9YP8-201ENST00000441913 500 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH6P55285 AL031659.1-201ENST00000447075 539 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH6P55285 USP9YP25-201ENST00000457708 443 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.14□□□□□ -2.07
CDH6P55285 AC055855.1-201ENST00000489563 579 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RPL9P6-201ENST00000492764 598 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH6P55285 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH6P55285 RNA5SP112-201ENST00000515937 99 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
CDH6P55285 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
CDH6P55285 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.14□□□□□ -2.07
CDH6P55285 AL121821.2-201ENST00000556081 394 ntBASIC2.14□□□□□ -2.07
CDH6P55285 MIR4293-201ENST00000584305 78 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC009314.1-201ENST00000603871 304 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AL450336.1-201ENST00000605180 586 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AL158042.1-201ENST00000605338 460 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC072039.2-201ENST00000608883 439 ntBASIC2.14□□□□□ -2.07
CDH6P55285 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH6P55285 AL136981.2-201ENST00000617319 734 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC007490.1-201ENST00000624321 703 ntBASIC2.14□□□□□ -2.07
CDH6P55285 AC010608.3-201ENST00000625048 527 ntBASIC2.14□□□□□ -2.07
CDH6P55285 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH6P55285 AL109809.4-201ENST00000603520 2185 ntBASIC2.13□□□□□ -2.07
CDH6P55285 SNORA64-201ENST00000384674 134 ntBASIC2.13□□□□□ -2.07
CDH6P55285 USP9YP6-201ENST00000413550 854 ntBASIC2.13□□□□□ -2.07
CDH6P55285 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH6P55285 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms