Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
USP11P51784 SAGE2P-201ENST00000420011 2126 ntBASIC4.79□□□□□ -1.64
USP11P51784 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
USP11P51784 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
USP11P51784 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
USP11P51784 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP11P51784 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP11P51784 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.78□□□□□ -1.64
USP11P51784 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USP11P51784 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
USP11P51784 Y_RNA.29-201ENST00000362570 113 ntBASIC4.78□□□□□ -1.64
USP11P51784 RNU6-187P-201ENST00000384139 106 ntBASIC4.78□□□□□ -1.64
USP11P51784 RNU6-708P-201ENST00000384217 107 ntBASIC4.78□□□□□ -1.64
USP11P51784 RNU6-790P-201ENST00000384479 105 ntBASIC4.78□□□□□ -1.64
USP11P51784 PCNPP3-201ENST00000393579 471 ntBASIC4.78□□□□□ -1.64
USP11P51784 RNU6-1203P-201ENST00000410703 110 ntBASIC4.78□□□□□ -1.64
USP11P51784 RNU2-25P-201ENST00000411041 191 ntBASIC4.78□□□□□ -1.64
USP11P51784 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 COX6B1P7-201ENST00000430845 235 ntBASIC4.78□□□□□ -1.64
USP11P51784 AC004383.1-201ENST00000438135 289 ntBASIC4.78□□□□□ -1.64
USP11P51784 DAP3P1-201ENST00000441522 278 ntBASIC4.78□□□□□ -1.64
USP11P51784 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 AL121871.1-201ENST00000443413 436 ntBASIC4.78□□□□□ -1.64
USP11P51784 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 AL360271.2-201ENST00000447710 161 ntBASIC4.78□□□□□ -1.64
USP11P51784 AC010469.1-201ENST00000463864 576 ntBASIC4.78□□□□□ -1.64
USP11P51784 RPS27AP13-201ENST00000498403 237 ntBASIC4.78□□□□□ -1.64
USP11P51784 AC026784.1-201ENST00000507986 352 ntBASIC4.78□□□□□ -1.64
USP11P51784 AC113155.1-201ENST00000511141 769 ntBASIC4.78□□□□□ -1.64
USP11P51784 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.78□□□□□ -1.64
USP11P51784 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 AC025884.1-201ENST00000556034 378 ntBASIC4.78□□□□□ -1.64
USP11P51784 MIR4273-201ENST00000582824 84 ntBASIC4.78□□□□□ -1.64
USP11P51784 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.78□□□□□ -1.64
USP11P51784 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 AC073410.2-201ENST00000603240 332 ntBASIC4.78□□□□□ -1.64
USP11P51784 AL031601.2-202ENST00000622650 282 ntBASIC4.78□□□□□ -1.64
USP11P51784 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USP11P51784 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USP11P51784 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP11P51784 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
USP11P51784 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.77□□□□□ -1.65
USP11P51784 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 Y_RNA.84-201ENST00000363011 104 ntBASIC4.77□□□□□ -1.65
USP11P51784 RNU6-280P-201ENST00000364145 104 ntBASIC4.77□□□□□ -1.65
USP11P51784 Y_RNA.471-201ENST00000384312 102 ntBASIC4.77□□□□□ -1.65
USP11P51784 MIR578-201ENST00000384828 96 ntBASIC4.77□□□□□ -1.65
USP11P51784 MIR215-201ENST00000384858 110 ntBASIC4.77□□□□□ -1.65
USP11P51784 MIR625-201ENST00000385047 85 ntBASIC4.77□□□□□ -1.65
USP11P51784 SNORD58.1-201ENST00000391313 66 ntBASIC4.77□□□□□ -1.65
USP11P51784 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.77□□□□□ -1.65
USP11P51784 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.77□□□□□ -1.65
USP11P51784 MYL8P-204ENST00000431574 518 ntBASIC4.77□□□□□ -1.65
USP11P51784 AC104332.1-201ENST00000440471 797 ntBASIC4.77□□□□□ -1.65
USP11P51784 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
USP11P51784 NDUFB4P9-201ENST00000511646 388 ntBASIC4.77□□□□□ -1.65
USP11P51784 HIGD1AP3-201ENST00000515857 278 ntBASIC4.77□□□□□ -1.65
USP11P51784 SNORD116-26-201ENST00000516006 96 ntBASIC4.77□□□□□ -1.65
USP11P51784 SNORA31.3-201ENST00000516029 96 ntBASIC4.77□□□□□ -1.65
USP11P51784 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.77□□□□□ -1.65
USP11P51784 AC087369.1-201ENST00000520775 996 ntBASIC4.77□□□□□ -1.65
USP11P51784 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.77□□□□□ -1.65
USP11P51784 RN7SL600P-201ENST00000581811 299 ntBASIC4.77□□□□□ -1.65
USP11P51784 AC067852.4-201ENST00000590314 478 ntBASIC4.77□□□□□ -1.65
USP11P51784 AL390123.1-201ENST00000603216 237 ntBASIC4.77□□□□□ -1.65
USP11P51784 AC005344.1-201ENST00000613391 459 ntBASIC4.77□□□□□ -1.65
USP11P51784 AL450472.3-201ENST00000615578 367 ntBASIC4.77□□□□□ -1.65
USP11P51784 MIR6130-201ENST00000619419 109 ntBASIC4.77□□□□□ -1.65
USP11P51784 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 MIR4496-201ENST00000635896 61 ntBASIC4.77□□□□□ -1.65
USP11P51784 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.77□□□□□ -1.65
USP11P51784 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
USP11P51784 Z73965.1-201ENST00000623412 2297 ntBASIC4.77□□□□□ -1.65
USP11P51784 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP11P51784 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP11P51784 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP11P51784 Y_RNA.183-201ENST00000363882 113 ntBASIC4.76□□□□□ -1.65
USP11P51784 RNY1-201ENST00000364228 113 ntBASIC4.76□□□□□ -1.65
USP11P51784 RN7SKP227-201ENST00000364445 330 ntBASIC4.76□□□□□ -1.65
USP11P51784 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
USP11P51784 MT-TC-201ENST00000387405 66 ntBASIC4.76□□□□□ -1.65
USP11P51784 MIR548I2-201ENST00000408348 149 ntBASIC4.76□□□□□ -1.65
USP11P51784 MIR548H3-201ENST00000408771 118 ntBASIC4.76□□□□□ -1.65
USP11P51784 RNU6-325P-201ENST00000411132 105 ntBASIC4.76□□□□□ -1.65
USP11P51784 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 CYCSP33-201ENST00000414485 327 ntBASIC4.76□□□□□ -1.65
USP11P51784 BX842559.1-201ENST00000419615 532 ntBASIC4.76□□□□□ -1.65
USP11P51784 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 RPL23AP46-201ENST00000438548 490 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms